When I use coverm genome -m count to get total number of reads mapping, I see 7174 reads from a given sample map to a bin. But when I use coverm genome -m mean or coverm genome -m covered_bases I get 0. Is this a this just a matter of rounding (the total genome bin size is 4,208,222 bp)?
When I use
coverm genome -m count
to get total number of reads mapping, I see 7174 reads from a given sample map to a bin. But when I usecoverm genome -m mean
orcoverm genome -m covered_bases
I get 0. Is this a this just a matter of rounding (the total genome bin size is 4,208,222 bp)?For raw counts I ran:
For mean I ran:
Thanks!