Closed donovan-h-parks closed 9 years ago
Running FinishM as follows:
finishm roundup --gapfill-with-max-coverage --genomes ../good_bins/arg13/arg13.bin_1.fna,../good_bins/arg13/arg13.bin_2.fna --fastq-gz ../../seq_data/qc/arg13.qc.1.fq.gz,../../seq_data/qc/arg13.qc.2.fq.gz --output-directory arg13 --velvet-directory arg13/velvet
This crashes with the following: /srv/sw/finishm/0.0.3/lib/finishm/roundup.rb:329:in `piece_together_gapfill': wrong number of arguments (7 for 8) (ArgumentError)
/srv/sw/finishm/0.0.3/lib/finishm/roundup.rb:329:in `piece_together_gapfill': wrong number of arguments (7 for 8) (ArgumentError)
Running FinishM as follows:
finishm roundup --gapfill-with-max-coverage --genomes ../good_bins/arg13/arg13.bin_1.fna,../good_bins/arg13/arg13.bin_2.fna --fastq-gz ../../seq_data/qc/arg13.qc.1.fq.gz,../../seq_data/qc/arg13.qc.2.fq.gz --output-directory arg13 --velvet-directory arg13/velvetThis crashes with the following:
/srv/sw/finishm/0.0.3/lib/finishm/roundup.rb:329:in `piece_together_gapfill': wrong number of arguments (7 for 8) (ArgumentError)