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wwu-mmll / mccqrnn_docker

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Do Nifti images need to be pre-processed #1

Closed RDoerfel closed 1 year ago

RDoerfel commented 1 year ago

Do I input the raw T1w image, or does the input need to be pre-processed using CAT12?

jernsting commented 1 year ago

The images have to be preprocessed with CAT12.

RDoerfel commented 1 year ago

Great, thanks for the quick answer!

RDoerfel commented 1 year ago

Quick follow-up question. Did you use the standalone version or any other scripts to streamline this without the use of the GUI? I find the documentation a bit sparse.

jernsting commented 1 year ago

I have to refer to the paper in this regard. I think we used the default settings of CAT12 and used the standalone version to preprocess the data without GUI.

RDoerfel commented 1 year ago

Yes, the paper states standard parameters. Just trying to figure out a way to run with the standard parameters but without having to install Matlab runtime because it requires admin rights, which I do not have.