wwu-mmll / mccqrnn_docker

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Input file and export #4

Open tannerjared opened 12 months ago

tannerjared commented 12 months ago

I have a couple (probably related) issues.

The first is which CAT12 file is the input? I'm assuming it's the mwp1{subject}.nii file. Is this correct? If not, which is the correct file?

Second issue is when I run this with the mwp1....nii file, I get this error

/usr/local/envs/mccqrnn/lib/python3.7/site-packages/nilearn/image/resampling.py:583: RuntimeWarning: NaNs or infinite values are present in the data passed to resample. This is a bad thing as they make resampling ill-defined and much slower. fill_value=fill_value)

And this is the output, which doesn't seem correct. raw_predictions.csv

Any thoughts on a solution?