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wwylab / MuSE

Somatic point mutation caller
GNU General Public License v2.0
18 stars 6 forks source link

Request: update conda package to latest version #20

Open famosab opened 1 month ago

famosab commented 1 month ago

I would like to integrate MuSE in a pipeline and everything would be easier if it was available as conda package. I saw that the Version 1.0 was published to bioconda. Maybe you can also do it with Version 2!

famosab commented 1 month ago

FYI: I will try and update the Package recipe: https://bioconda.github.io/recipes/muse/README.html If it works I'll close the issue :)

famosab commented 1 month ago

See https://github.com/bioconda/bioconda-recipes/pull/47957

jiyunmaths commented 1 month ago

@famosab Thank you for working on the conda package of MuSE 2. Please note MuSE 2 relies on more C/C++ libraries than MuSE 1 and it also has a more complicated building process than the old version.

famosab commented 1 month ago

Thanks for the heads up. For now the Azure CI tests in bioconda are down but when they come back up we will see if it works as I thought. Else I'll come back to you!

famosab commented 2 weeks ago

I just mentioned you in the PR. I am unsure how to continue and integrate the dependencies in the build.sh