search

wyang17 / SQuIRE

Software for Quantifying Interspersed Repeat Expression
Other
49 stars 30 forks source link

bioconductor-deseq2 1.16.1 but there are no viable options #102

Open sahuno opened 3 months ago

sahuno commented 3 months ago

could you pls help? squire seem uninstallable following the process

bash:islogin01:/data1/greenbab/projects/triplicates_epigenetics_diyva/RNA/CT 1008 $ conda config --describe channel_priority
# # channel_priority (ChannelPriority)
# #   Accepts values of 'strict', 'flexible', and 'disabled'. The default
# #   value is 'flexible'. With strict channel priority, packages in lower
# #   priority channels are not considered if a package with the same name
# #   appears in a higher priority channel. With flexible channel priority,
# #   the solver may reach into lower priority channels to fulfill
# #   dependencies, rather than raising an unsatisfiable error. With channel
# #   priority disabled, package version takes precedence, and the
# #   configured priority of channels is used only to break ties. In
# #   previous versions of conda, this parameter was configured as either
# #   True or False. True is now an alias to 'flexible'.
# # 
# channel_priority: flexible

bash:islogin01:/data1/greenbab/projects/triplicates_epigenetics_diyva/RNA/CT 1009 $ 
bash:islogin01:/data1/greenbab/projects/triplicates_epigenetics_diyva/RNA/CT 1007 $ mamba create -n squire -c bioconda squire

Looking for: ['squire']

pkgs/main/linux-64                                   6.3MB @   4.9MB/s  1.3s
bioconda/linux-64                                    5.7MB @   4.1MB/s  1.4s
bioconda/noarch                                      5.3MB @   3.9MB/s  1.4s
pkgs/r/noarch                                                 No change
pkgs/main/noarch                                              No change
pkgs/r/linux-64                                      1.6MB @ 922.8kB/s  0.3s
conda-forge/noarch                                  16.1MB @   8.4MB/s  1.9s
conda-forge/linux-64                                37.0MB @  16.0MB/s  2.3s
Could not solve for environment specs
The following package could not be installed
└─ squire is not installable because it requires
   ├─ bioconductor-deseq2 1.16.1  but there are no viable options
   │  ├─ bioconductor-deseq2 1.16.1 would require
   │  │  └─ r-base 3.4.1*  but there are no viable options
   │  │     ├─ r-base 3.4.1 would require
   │  │     │  ├─ curl with the potential options
   │  │     │  │  ├─ curl [7.52.1|7.54.1] would require
   │  │     │  │  │  └─ openssl 1.0.* , which can be installed;
   │  │     │  │  ├─ curl [7.58.0|7.59.0|7.60.0] would require
   │  │     │  │  │  └─ zlib 1.2.11 , which can be installed;
   │  │     │  │  ├─ curl [7.55.1|7.57.0|...|7.76.1] would require
   │  │     │  │  │  ├─ libcurl [7.68.0 hda55be3_0|7.76.1 hc4aaa36_1], which requires
   │  │     │  │  │  │  └─ zlib >=1.2.11,<1.3.0a0  with the potential options
   │  │     │  │  │  │     ├─ zlib 1.2.11, which can be installed;
   │  │     │  │  │  │     ├─ zlib 1.2.12 conflicts with any installable versions previously reported;
   │  │     │  │  │  │     ├─ zlib 1.2.12 would require
   │  │     │  │  │  │     │  └─ libzlib 1.2.12 h166bdaf_2, which requires
   │  │     │  │  │  │     │     └─ zlib 1.2.12 *_2, which can be installed;
   │  │     │  │  │  │     ├─ zlib 1.2.12 would require
   │  │     │  │  │  │     │  └─ libzlib 1.2.12 h166bdaf_3, which requires
   │  │     │  │  │  │     │     └─ zlib 1.2.12 *_3, which can be installed;
   │  │     │  │  │  │     ├─ zlib 1.2.12 would require
   │  │     │  │  │  │     │  └─ libzlib 1.2.12 h166bdaf_4, which requires
   │  │     │  │  │  │     │     └─ zlib 1.2.12 *_4, which can be installed;
   │  │     │  │  │  │     ├─ zlib 1.2.13 would require
   │  │     │  │  │  │     │  └─ libzlib 1.2.13 h166bdaf_4, which requires
   │  │     │  │  │  │     │     └─ zlib 1.2.13 *_4, which conflicts with any installable versions previously reported;
   │  │     │  │  │  │     ├─ zlib 1.2.13 conflicts with any installable versions previously reported;
   │  │     │  │  │  │     └─ zlib 1.2.13 would require
   │  │     │  │  │  │        └─ libzlib 1.2.13 hd590300_5, which requires
   │  │     │  │  │  │           └─ zlib 1.2.13 *_5, which conflicts with any installable versions previously reported;
   │  │     │  │  │  └─ zlib >=1.2.11,<1.3.0a0  with the potential options
   │  │     │  │  │     ├─ zlib 1.2.11, which can be installed;
   │  │     │  │  │     ├─ zlib 1.2.12 conflicts with any installable versions previously reported;
   │  │     │  │  │     ├─ zlib 1.2.12, which cannot be installed (as previously explained);
   │  │     │  │  │     ├─ zlib 1.2.12, which cannot be installed (as previously explained);
   │  │     │  │  │     ├─ zlib 1.2.12, which cannot be installed (as previously explained);
   │  │     │  │  │     ├─ zlib 1.2.13, which cannot be installed (as previously explained);
   │  │     │  │  │     ├─ zlib 1.2.13 conflicts with any installable versions previously reported;
   │  │     │  │  │     └─ zlib 1.2.13, which cannot be installed (as previously explained);
   │  │     │  │  ├─ curl [7.71.0|7.71.1|...|7.82.0] would require
   │  │     │  │  │  ├─ krb5 [>=1.18.2,<1.19.0a0 |>=1.19.1,<1.20.0a0 |>=1.19.2,<1.20.0a0 ] with the potential options
   │  │     │  │  │  │  ├─ krb5 [1.18.2|1.19.1|...|1.21.3] would require
   │  │     │  │  │  │  │  └─ libedit >=3.1.20191231,<3.2.0a0  with the potential options
   │  │     │  │  │  │  │     ├─ libedit 3.1.20191231 would require
   │  │     │  │  │  │  │     │  └─ ncurses >=6.1,<7.0.0a0 , which can be installed;
   │  │     │  │  │  │  │     ├─ libedit [3.1.20191231|3.1.20210216|3.1.20210714] would require
   │  │     │  │  │  │  │     │  └─ ncurses [>=6.2,<7.0.0a0 |>=6.2,<7.0a0 ], which can be installed;
   │  │     │  │  │  │  │     ├─ libedit [3.1.20210910|3.1.20221030] would require
   │  │     │  │  │  │  │     │  └─ ncurses >=6.3,<7.0a0 , which can be installed;
   │  │     │  │  │  │  │     └─ libedit 3.1.20230828 would require
   │  │     │  │  │  │  │        └─ ncurses >=6.4,<7.0a0 , which can be installed;
   │  │     │  │  │  │  ├─ krb5 1.19.2 would require
   │  │     │  │  │  │  │  └─ libedit >=3.1.20210216,<3.2.0a0 , which can be installed (as previously explained);
   │  │     │  │  │  │  └─ krb5 [1.19.4|1.20.1] would require
   │  │     │  │  │  │     └─ libedit >=3.1.20221030,<3.2.0a0 , which can be installed (as previously explained);
   │  │     │  │  │  ├─ libcurl [7.71.1 h303737a_2|7.80.0 h0b77cf5_0|7.82.0 h0b77cf5_0] with the potential options
   │  │     │  │  │  │  ├─ libcurl [7.80.0|7.82.0] would require
   │  │     │  │  │  │  │  ├─ krb5 >=1.19.2,<1.20.0a0 , which can be installed (as previously explained);
   │  │     │  │  │  │  │  └─ zlib >=1.2.11,<1.3.0a0  with the potential options
   │  │     │  │  │  │  │     ├─ zlib 1.2.11, which can be installed;
   │  │     │  │  │  │  │     ├─ zlib 1.2.12 conflicts with any installable versions previously reported;
   │  │     │  │  │  │  │     ├─ zlib 1.2.12, which cannot be installed (as previously explained);
   │  │     │  │  │  │  │     ├─ zlib 1.2.12, which cannot be installed (as previously explained);
   │  │     │  │  │  │  │     ├─ zlib 1.2.12, which cannot be installed (as previously explained);
   │  │     │  │  │  │  │     ├─ zlib 1.2.13, which cannot be installed (as previously explained);
   │  │     │  │  │  │  │     ├─ zlib 1.2.13 conflicts with any installable versions previously reported;
   │  │     │  │  │  │  │     └─ zlib 1.2.13, which cannot be installed (as previously explained);
   │  │     │  │  │  │  └─ libcurl [7.71.1|7.88.1] would require
   │  │     │  │  │  │     └─ krb5 [>=1.19.1,<1.20.0a0 |>=1.20.1,<1.21.0a0 ], which can be installed (as previously explained);
   │  │     │  │  │  └─ zlib >=1.2.11,<1.3.0a0  with the potential options
   │  │     │  │  │     ├─ zlib 1.2.11, which can be installed;
   │  │     │  │  │     ├─ zlib 1.2.12 conflicts with any installable versions previously reported;
   │  │     │  │  │     ├─ zlib 1.2.12, which cannot be installed (as previously explained);
   │  │     │  │  │     ├─ zlib 1.2.12, which cannot be installed (as previously explained);
   │  │     │  │  │     ├─ zlib 1.2.12, which cannot be installed (as previously explained);
   │  │     │  │  │     ├─ zlib 1.2.13, which cannot be installed (as previously explained);
   │  │     │  │  │     ├─ zlib 1.2.13 conflicts with any installable versions previously reported;
   │  │     │  │  │     └─ zlib 1.2.13, which cannot be installed (as previously explained);
   │  │     │  │  ├─ curl 7.79.0 would require
   │  │     │  │  │  └─ libcurl 7.79.0 h2574ce0_0, which does not exist (perhaps a missing channel);
   │  │     │  │  ├─ curl [7.80.0|7.81.0|7.82.0|7.83.0|7.83.1] would require
   │  │     │  │  │  ├─ krb5 [>=1.19.2,<1.20.0a0 |>=1.19.3,<1.20.0a0 ], which can be installed (as previously explained);
   │  │     │  │  │  └─ libzlib >=1.2.11,<2.0.0a0  with the potential options
   │  │     │  │  │     ├─ libzlib 1.2.13, which cannot be installed (as previously explained);
   │  │     │  │  │     ├─ libzlib 1.2.13 would require
   │  │     │  │  │     │  └─ zlib 1.2.13 *_6, which conflicts with any installable versions previously reported;
   │  │     │  │  │     ├─ libzlib 1.2.13, which cannot be installed (as previously explained);
   │  │     │  │  │     ├─ libzlib 1.2.11 would require
   │  │     │  │  │     │  └─ zlib 1.2.11 *_1014, which can be installed;
   │  │     │  │  │     ├─ libzlib 1.2.11 would require
   │  │     │  │  │     │  └─ zlib 1.2.11 *_1012, which can be installed;
   │  │     │  │  │     ├─ libzlib 1.2.11 would require
   │  │     │  │  │     │  └─ zlib 1.2.11 *_1013, which can be installed;
   │  │     │  │  │     ├─ libzlib 1.2.12 would require
   │  │     │  │  │     │  └─ zlib 1.2.12 *_0, which can be installed;
   │  │     │  │  │     ├─ libzlib 1.2.12 would require
   │  │     │  │  │     │  └─ zlib 1.2.12 *_1, which can be installed;
   │  │     │  │  │     ├─ libzlib 1.2.12, which can be installed (as previously explained);
   │  │     │  │  │     ├─ libzlib 1.2.12, which can be installed (as previously explained);
   │  │     │  │  │     ├─ libzlib 1.2.12, which can be installed (as previously explained);
   │  │     │  │  │     ├─ libzlib 1.3 would require
   │  │     │  │  │     │  └─ zlib 1.3 *_0, which can be installed;
   │  │     │  │  │     ├─ libzlib 1.3.1 would require
   │  │     │  │  │     │  └─ zlib 1.3.1 *_1, which can be installed;
   │  │     │  │  │     └─ libzlib 1.3.1 would require
   │  │     │  │  │        └─ zlib 1.3.1 *_0, which can be installed;
   │  │     │  │  ├─ curl 7.85.0 would require
   │  │     │  │  │  ├─ krb5 >=1.19.3,<1.20.0a0 , which can be installed (as previously explained);
   │  │     │  │  │  └─ libzlib >=1.2.12,<2.0.0a0  with the potential options
   │  │     │  │  │     ├─ libzlib 1.2.13, which cannot be installed (as previously explained);
   │  │     │  │  │     ├─ libzlib 1.2.13, which cannot be installed (as previously explained);
   │  │     │  │  │     ├─ libzlib 1.2.13, which cannot be installed (as previously explained);
   │  │     │  │  │     ├─ libzlib 1.2.12, which can be installed (as previously explained);
   │  │     │  │  │     ├─ libzlib 1.2.12, which can be installed (as previously explained);
   │  │     │  │  │     ├─ libzlib 1.2.12, which can be installed (as previously explained);
   │  │     │  │  │     ├─ libzlib 1.2.12, which can be installed (as previously explained);
   │  │     │  │  │     ├─ libzlib 1.2.12, which can be installed (as previously explained);
   │  │     │  │  │     ├─ libzlib 1.3, which can be installed (as previously explained);
   │  │     │  │  │     ├─ libzlib 1.3.1, which can be installed (as previously explained);
   │  │     │  │  │     └─ libzlib 1.3.1, which can be installed (as previously explained);
   │  │     │  │  ├─ curl [7.86.0|7.87.0|...|8.8.0] would require
   │  │     │  │  │  ├─ krb5 [>=1.19.3,<1.20.0a0 |>=1.20.1,<1.21.0a0 |>=1.21.1,<1.22.0a0 |>=1.21.2,<1.22.0a0 |>=1.21.3,<1.22.0a0 ], which can be installed (as previously explained);
   │  │     │  │  │  ├─ libcurl 7.88.1 hdc1c0ab_1, which can be installed (as previously explained);
   │  │     │  │  │  └─ libzlib [>=1.2.13,<2.0.0a0 |>=1.2.13,<2.0a0 ] with the potential options
   │  │     │  │  │     ├─ libzlib 1.2.13, which cannot be installed (as previously explained);
   │  │     │  │  │     ├─ libzlib 1.2.13, which cannot be installed (as previously explained);
   │  │     │  │  │     ├─ libzlib 1.2.13, which cannot be installed (as previously explained);
   │  │     │  │  │     ├─ libzlib 1.3, which can be installed (as previously explained);
   │  │     │  │  │     ├─ libzlib 1.3.1, which can be installed (as previously explained);
   │  │     │  │  │     └─ libzlib 1.3.1, which can be installed (as previously explained);
   │  │     │  │  ├─ curl [8.9.0|8.9.1] would require
   │  │     │  │  │  ├─ krb5 >=1.21.3,<1.22.0a0 , which can be installed (as previously explained);
   │  │     │  │  │  └─ libzlib >=1.3.1,<2.0a0 , which can be installed (as previously explained);
   │  │     │  │  ├─ curl 7.83.0 would require
   │  │     │  │  │  └─ libcurl 7.83.0 h0b77cf5_0, which does not exist (perhaps a missing channel);
   │  │     │  │  ├─ curl 7.84.0 would require
   │  │     │  │  │  └─ libcurl 7.84.0 h91b91d3_0, which requires
   │  │     │  │  │     ├─ krb5 >=1.19.2,<1.20.0a0 , which can be installed (as previously explained);
   │  │     │  │  │     └─ zlib >=1.2.12,<1.3.0a0  but there are no viable options
   │  │     │  │  │        ├─ zlib 1.2.12 conflicts with any installable versions previously reported;
   │  │     │  │  │        ├─ zlib 1.2.12, which cannot be installed (as previously explained);
   │  │     │  │  │        ├─ zlib 1.2.12, which cannot be installed (as previously explained);
   │  │     │  │  │        ├─ zlib 1.2.12, which cannot be installed (as previously explained);
   │  │     │  │  │        ├─ zlib 1.2.13, which cannot be installed (as previously explained);
   │  │     │  │  │        ├─ zlib 1.2.13 conflicts with any installable versions previously reported;
   │  │     │  │  │        └─ zlib 1.2.13, which cannot be installed (as previously explained);
   │  │     │  │  ├─ curl [7.85.0|7.86.0|...|8.7.1] would require
   │  │     │  │  │  └─ libcurl [7.85.0 h91b91d3_0|7.86.0 h91b91d3_0|...|8.7.1 h251f7ec_0], which requires
   │  │     │  │  │     ├─ krb5 [>=1.19.2,<1.20.0a0 |>=1.20.1,<1.21.0a0 ], which can be installed (as previously explained);
   │  │     │  │  │     └─ zlib >=1.2.13,<1.3.0a0  but there are no viable options
   │  │     │  │  │        ├─ zlib 1.2.13, which cannot be installed (as previously explained);
   │  │     │  │  │        ├─ zlib 1.2.13 conflicts with any installable versions previously reported;
   │  │     │  │  │        └─ zlib 1.2.13, which cannot be installed (as previously explained);
   │  │     │  │  └─ curl [7.88.1|8.1.1] would require
   │  │     │  │     └─ libcurl [7.88.1 h91b91d3_0|8.1.1 h91b91d3_0], which requires
   │  │     │  │        ├─ krb5 >=1.19.4,<1.20.0a0 , which can be installed (as previously explained);
   │  │     │  │        └─ zlib >=1.2.13,<1.3.0a0  but there are no viable options
   │  │     │  │           ├─ zlib 1.2.13, which cannot be installed (as previously explained);
   │  │     │  │           ├─ zlib 1.2.13 conflicts with any installable versions previously reported;
   │  │     │  │           └─ zlib 1.2.13, which cannot be installed (as previously explained);
   │  │     │  ├─ ncurses 5.9* , which conflicts with any installable versions previously reported;
   │  │     │  ├─ readline 6.2* , which requires
   │  │     │  │  └─ ncurses 5.9* , which conflicts with any installable versions previously reported;
   │  │     │  └─ zlib 1.2.8 , which conflicts with any installable versions previously reported;
   │  │     ├─ r-base 3.4.1 would require
   │  │     │  ├─ ncurses [5.9 |5.9* ], which conflicts with any installable versions previously reported;
   │  │     │  ├─ readline 6.2* , which cannot be installed (as previously explained);
   │  │     │  └─ zlib 1.2.11 , which can be installed;
   │  │     ├─ r-base 3.4.1 would require
   │  │     │  ├─ ncurses 5.9 , which conflicts with any installable versions previously reported;
   │  │     │  ├─ readline 7.0 , which conflicts with any installable versions previously reported;
   │  │     │  └─ zlib 1.2.11 , which can be installed;
   │  │     ├─ r-base 3.4.1 would require
   │  │     │  ├─ openssl >=1.0.2o,<1.0.3a , which can be installed;
   │  │     │  ├─ readline >=7.0,<8.0a0 , which conflicts with any installable versions previously reported;
   │  │     │  └─ zlib >=1.2.11,<1.3.0a0  with the potential options
   │  │     │     ├─ zlib 1.2.11, which can be installed;
   │  │     │     ├─ zlib 1.2.12 conflicts with any installable versions previously reported;
   │  │     │     ├─ zlib 1.2.12, which cannot be installed (as previously explained);
   │  │     │     ├─ zlib 1.2.12, which cannot be installed (as previously explained);
   │  │     │     ├─ zlib 1.2.12, which cannot be installed (as previously explained);
   │  │     │     ├─ zlib 1.2.13, which cannot be installed (as previously explained);
   │  │     │     ├─ zlib 1.2.13 conflicts with any installable versions previously reported;
   │  │     │     └─ zlib 1.2.13, which cannot be installed (as previously explained);
   │  │     └─ r-base [3.3.2|3.4.1] would require
   │  │        └─ icu 54.* , which does not exist (perhaps a missing channel);
   │  └─ bioconductor-deseq2 1.16.1 would require
   │     └─ r-base 3.3.2*  but there are no viable options
   │        ├─ r-base [3.3.2|3.4.1], which cannot be installed (as previously explained);
   │        └─ r-base 3.3.2 conflicts with any installable versions previously reported;
   ├─ python 2.7.*  but there are no viable options
   │  ├─ python [2.7.12|2.7.13|2.7.14] would require
   │  │  ├─ openssl 1.0.* , which can be installed;
   │  │  └─ readline 6.2* , which cannot be installed (as previously explained);
   │  ├─ python 2.7.14 would require
   │  │  ├─ openssl 1.0.* , which can be installed;
   │  │  ├─ readline 6.2* , which cannot be installed (as previously explained);
   │  │  └─ zlib 1.2.11 , which can be installed;
   │  ├─ python [2.7.14|2.7.15] would require
   │  │  ├─ readline [7.0 |7.0.* ], which conflicts with any installable versions previously reported;
   │  │  └─ zlib [1.2.11 |1.2.11.* ], which can be installed;
   │  ├─ python [2.7.13|2.7.14|2.7.15|2.7.16|2.7.17] would require
   │  │  ├─ readline [7.* |>=7.0,<8.0a0 ], which conflicts with any installable versions previously reported;
   │  │  └─ zlib >=1.2.11,<1.3.0a0  with the potential options
   │  │     ├─ zlib 1.2.11, which can be installed;
   │  │     ├─ zlib 1.2.12 conflicts with any installable versions previously reported;
   │  │     ├─ zlib 1.2.12, which cannot be installed (as previously explained);
   │  │     ├─ zlib 1.2.12, which cannot be installed (as previously explained);
   │  │     ├─ zlib 1.2.12, which cannot be installed (as previously explained);
   │  │     ├─ zlib 1.2.13, which cannot be installed (as previously explained);
   │  │     ├─ zlib 1.2.13 conflicts with any installable versions previously reported;
   │  │     └─ zlib 1.2.13, which cannot be installed (as previously explained);
   │  ├─ python [2.7.15|2.7.18] would require
   │  │  ├─ readline >=8.0,<9.0a0 , which conflicts with any installable versions previously reported;
   │  │  └─ zlib >=1.2.11,<1.3.0a0  with the potential options
   │  │     ├─ zlib 1.2.11, which can be installed;
   │  │     ├─ zlib 1.2.12 conflicts with any installable versions previously reported;
   │  │     ├─ zlib 1.2.12, which cannot be installed (as previously explained);
   │  │     ├─ zlib 1.2.12, which cannot be installed (as previously explained);
   │  │     ├─ zlib 1.2.12, which cannot be installed (as previously explained);
   │  │     ├─ zlib 1.2.13, which cannot be installed (as previously explained);
   │  │     ├─ zlib 1.2.13 conflicts with any installable versions previously reported;
   │  │     └─ zlib 1.2.13, which cannot be installed (as previously explained);
   │  └─ python 2.7.18 would require
   │     ├─ readline >=8.0,<9.0a0 , which conflicts with any installable versions previously reported;
   │     └─ zlib >=1.2.13,<1.3.0a0  but there are no viable options
   │        ├─ zlib 1.2.13, which cannot be installed (as previously explained);
   │        ├─ zlib 1.2.13 conflicts with any installable versions previously reported;
   │        └─ zlib 1.2.13, which cannot be installed (as previously explained);
   ├─ r-base 3.4.1 , which cannot be installed (as previously explained);
   ├─ samtools 1.1  but there are no viable options
   │  ├─ samtools 1.1 would require
   │  │  ├─ openssl >=1.1.0,<=1.1.1 , which conflicts with any installable versions previously reported;
   │  │  └─ zlib 1.2.8 , which conflicts with any installable versions previously reported;
   │  ├─ samtools 1.1 would require
   │  │  ├─ ncurses >=6.3,<7.0a0 , which can be installed;
   │  │  ├─ openssl >=1.1.0,<=1.1.1 , which conflicts with any installable versions previously reported;
   │  │  └─ zlib >=1.2.11,<1.3.0a0  with the potential options
   │  │     ├─ zlib 1.2.11, which can be installed;
   │  │     ├─ zlib 1.2.12 conflicts with any installable versions previously reported;
   │  │     ├─ zlib 1.2.12, which cannot be installed (as previously explained);
   │  │     ├─ zlib 1.2.12, which cannot be installed (as previously explained);
   │  │     ├─ zlib 1.2.12, which cannot be installed (as previously explained);
   │  │     ├─ zlib 1.2.13, which cannot be installed (as previously explained);
   │  │     ├─ zlib 1.2.13 conflicts with any installable versions previously reported;
   │  │     └─ zlib 1.2.13, which cannot be installed (as previously explained);
   │  ├─ samtools 1.1 would require
   │  │  ├─ ncurses >=6.2,<6.3.0a0 , which can be installed;
   │  │  ├─ openssl >=1.1.0,<=1.1.1 , which conflicts with any installable versions previously reported;
   │  │  └─ zlib >=1.2.11,<1.3.0a0  with the potential options
   │  │     ├─ zlib 1.2.11, which can be installed;
   │  │     ├─ zlib 1.2.12 conflicts with any installable versions previously reported;
   │  │     ├─ zlib 1.2.12, which cannot be installed (as previously explained);
   │  │     ├─ zlib 1.2.12, which cannot be installed (as previously explained);
   │  │     ├─ zlib 1.2.12, which cannot be installed (as previously explained);
   │  │     ├─ zlib 1.2.13, which cannot be installed (as previously explained);
   │  │     ├─ zlib 1.2.13 conflicts with any installable versions previously reported;
   │  │     └─ zlib 1.2.13, which cannot be installed (as previously explained);
   │  ├─ samtools 1.1 would require
   │  │  ├─ libzlib >=1.2.13,<1.3.0a0 , which cannot be installed (as previously explained);
   │  │  ├─ ncurses >=6.3,<7.0a0 , which can be installed;
   │  │  └─ zlib with the potential options
   │  │     ├─ zlib 1.2.11, which can be installed;
   │  │     ├─ zlib 1.2.8 conflicts with any installable versions previously reported;
   │  │     ├─ zlib 1.2.12 conflicts with any installable versions previously reported;
   │  │     ├─ zlib 1.2.12, which cannot be installed (as previously explained);
   │  │     ├─ zlib 1.2.12, which cannot be installed (as previously explained);
   │  │     ├─ zlib 1.2.12, which cannot be installed (as previously explained);
   │  │     ├─ zlib 1.2.13, which cannot be installed (as previously explained);
   │  │     ├─ zlib 1.2.13 conflicts with any installable versions previously reported;
   │  │     ├─ zlib 1.2.13, which cannot be installed (as previously explained);
   │  │     └─ zlib [1.3|1.3.1], which can be installed;
   │  └─ samtools 1.1 would require
   │     ├─ ncurses >=6.1,<6.2.0a0 , which can be installed;
   │     ├─ openssl >=1.1.0,<=1.1.1 , which conflicts with any installable versions previously reported;
   │     └─ zlib >=1.2.11,<1.3.0a0  with the potential options
   │        ├─ zlib 1.2.11, which can be installed;
   │        ├─ zlib 1.2.12 conflicts with any installable versions previously reported;
   │        ├─ zlib 1.2.12, which cannot be installed (as previously explained);
   │        ├─ zlib 1.2.12, which cannot be installed (as previously explained);
   │        ├─ zlib 1.2.12, which cannot be installed (as previously explained);
   │        ├─ zlib 1.2.13, which cannot be installed (as previously explained);
   │        ├─ zlib 1.2.13 conflicts with any installable versions previously reported;
   │        └─ zlib 1.2.13, which cannot be installed (as previously explained);
   ├─ stringtie 1.3.3  with the potential options
   │  ├─ stringtie 1.3.3 would require
   │  │  └─ zlib 1.2.8* , which conflicts with any installable versions previously reported;
   │  └─ stringtie 1.3.3 would require
   │     └─ zlib 1.2.11* , which can be installed;
   ├─ ucsc-genepredtogtf with the potential options
   │  ├─ ucsc-genepredtogtf [332|357] would require
   │  │  ├─ openssl >=1.1.0,<=1.1.1 , which conflicts with any installable versions previously reported;
   │  │  └─ zlib with the potential options
   │  │     ├─ zlib 1.2.11, which can be installed;
   │  │     ├─ zlib 1.2.8 conflicts with any installable versions previously reported;
   │  │     ├─ zlib 1.2.12 conflicts with any installable versions previously reported;
   │  │     ├─ zlib 1.2.12, which cannot be installed (as previously explained);
   │  │     ├─ zlib 1.2.12, which cannot be installed (as previously explained);
   │  │     ├─ zlib 1.2.12, which cannot be installed (as previously explained);
   │  │     ├─ zlib 1.2.13, which cannot be installed (as previously explained);
   │  │     ├─ zlib 1.2.13 conflicts with any installable versions previously reported;
   │  │     ├─ zlib 1.2.13, which cannot be installed (as previously explained);
   │  │     └─ zlib [1.3|1.3.1], which can be installed;
   │  ├─ ucsc-genepredtogtf 357 would require
   │  │  └─ zlib 1.2.11* , which can be installed;
   │  ├─ ucsc-genepredtogtf [366|377] would require
   │  │  └─ zlib >=1.2.11,<1.3.0a0  with the potential options
   │  │     ├─ zlib 1.2.11, which can be installed;
   │  │     ├─ zlib 1.2.12 conflicts with any installable versions previously reported;
   │  │     ├─ zlib 1.2.12, which cannot be installed (as previously explained);
   │  │     ├─ zlib 1.2.12, which cannot be installed (as previously explained);
   │  │     ├─ zlib 1.2.12, which cannot be installed (as previously explained);
   │  │     ├─ zlib 1.2.13, which cannot be installed (as previously explained);
   │  │     ├─ zlib 1.2.13 conflicts with any installable versions previously reported;
   │  │     └─ zlib 1.2.13, which cannot be installed (as previously explained);
   │  └─ ucsc-genepredtogtf 465 would require
   │     ├─ libzlib >=1.2.13,<2.0a0  with the potential options
   │     │  ├─ libzlib 1.2.13, which cannot be installed (as previously explained);
   │     │  ├─ libzlib 1.2.13, which cannot be installed (as previously explained);
   │     │  ├─ libzlib 1.2.13, which cannot be installed (as previously explained);
   │     │  ├─ libzlib 1.3, which can be installed (as previously explained);
   │     │  ├─ libzlib 1.3.1, which can be installed (as previously explained);
   │     │  └─ libzlib 1.3.1, which can be installed (as previously explained);
   │     └─ zlib with the potential options
   │        ├─ zlib 1.2.11, which can be installed;
   │        ├─ zlib 1.2.8 conflicts with any installable versions previously reported;
   │        ├─ zlib 1.2.12 conflicts with any installable versions previously reported;
   │        ├─ zlib 1.2.12, which cannot be installed (as previously explained);
   │        ├─ zlib 1.2.12, which cannot be installed (as previously explained);
   │        ├─ zlib 1.2.12, which cannot be installed (as previously explained);
   │        ├─ zlib 1.2.13, which cannot be installed (as previously explained);
   │        ├─ zlib 1.2.13 conflicts with any installable versions previously reported;
   │        ├─ zlib 1.2.13, which cannot be installed (as previously explained);
   │        └─ zlib [1.3|1.3.1], which can be installed;
   └─ ucsc-gtftogenepred with the potential options
      ├─ ucsc-gtftogenepred [324|332|357] would require
      │  └─ openssl >=1.1.0,<=1.1.1 , which conflicts with any installable versions previously reported;
      ├─ ucsc-gtftogenepred 357 would require
      │  └─ zlib 1.2.11* , which can be installed;
      ├─ ucsc-gtftogenepred [366|377] would require
      │  └─ zlib >=1.2.11,<1.3.0a0  with the potential options
      │     ├─ zlib 1.2.11, which can be installed;
      │     ├─ zlib 1.2.12 conflicts with any installable versions previously reported;
      │     ├─ zlib 1.2.12, which cannot be installed (as previously explained);
      │     ├─ zlib 1.2.12, which cannot be installed (as previously explained);
      │     ├─ zlib 1.2.12, which cannot be installed (as previously explained);
      │     ├─ zlib 1.2.13, which cannot be installed (as previously explained);
      │     ├─ zlib 1.2.13 conflicts with any installable versions previously reported;
      │     └─ zlib 1.2.13, which cannot be installed (as previously explained);
      └─ ucsc-gtftogenepred 447 would require
         └─ libzlib >=1.2.13,<1.3.0a0 , which cannot be installed (as previously explained).
bash:islogin01:/data1/greenbab/projects/triplicates_epigenetics_diyva/RNA/CT 1008 $
J-Wengler commented 2 months ago

I am also having this error, any help would be greatly appreciated.

alfonsosaera commented 1 week ago

any update on this? I cannot install squire