wyang17 / SQuIRE

Software for Quantifying Interspersed Repeat Expression
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change call to shell from sh to bash #73

Open crankycrank opened 2 years ago

crankycrank commented 2 years ago

On Debian and its derivatives /bin/sh is symlinked to dash, which breaks expansion of $'\t', in particular, in the join command in Count.py (lines 492-494). I replaced /bin/sh with /bin/bash everywhere throughout the code for consistency.