Open fgualdr opened 1 year ago
Hi,
I am trying to use part of the SQUIRE code. Following the count step 5 files are generated:
Can I ask for a quick description of each with the header. at least the refGenecount is missing the header. Thanks a lot
Francesco
Hello @fgualdr,
I am trying to understand the outputs too. For what it worth the *_TEcounts.txt is described in the supplementary Table S1
*_TEcounts.txt
Hi,
I am trying to use part of the SQUIRE code. Following the count step 5 files are generated:
".out_abund.txt"
".out.gtf"
".out_refGenecounts.txt"
".out_subFcounts.txt"
".out_TEcounts.txt"
Can I ask for a quick description of each with the header. at least the refGenecount is missing the header. Thanks a lot
Francesco