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wyguo / ThreeDRNAseq

A pipeline for differential expression and differential alternative splicing analysis
https://github.com/wyguo/ThreeDRNAseq
GNU General Public License v3.0
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[Bug] quant.genes.sf auto-selection #2

Closed PeterVenhuizen closed 1 year ago

PeterVenhuizen commented 5 years ago

When selecting my Salmon quantification data, the 3D RNA-seq App automatically selects the quant.genes.sf file also available in the provided folders, together with the quant.sf file. (Re-)Moving the quant.genes.sf files fixes this issues, but this should be fixed in the R code

wyguo commented 5 years ago

When selecting my Salmon quantification data, the 3D RNA-seq App automatically selects the quant.genes.sf file also available in the provided folders, together with the quant.sf file. (Re-)Moving the quant.genes.sf files fixes this issues, but this should be fixed in the R code

Hi, Many thanks for the feedback. I am going to correct the bug and make improvement in the coming new version. :)

peterjc commented 1 year ago

Was this fixed? i.e. Can this issue be closed?

wyguo commented 1 year ago

Yes, thanks for your suggestions on improvement.

peterjc commented 1 year ago

@wyguo the issue is still open