in the manual (http://chibba.pgml.uga.edu/mcscan2/documentation/manual.pdf) you are stating that the user can specify if higher or lower values are preferred when using MCScanX_h ("When the third column is used, users need to specify whether higher or lower values are preferred.").
However, in the manual you are not stating how to state this information. Could you please mention explicitly in the manual how values are interpreted and how this information can be changed. Also, could you please describe in more detail how these values are interpreted.
Dear Yupeng,
in the manual (http://chibba.pgml.uga.edu/mcscan2/documentation/manual.pdf) you are stating that the user can specify if higher or lower values are preferred when using
MCScanX_h("When the third column is used, users need to specify whether higher or lower values are preferred.").However, in the manual you are not stating how to state this information. Could you please mention explicitly in the manual how values are interpreted and how this information can be changed. Also, could you please describe in more detail how these values are interpreted.