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wyp1125 / MCScanX

MCScanX: Multiple Collinearity Scan toolkit X version. The most popular synteny analysis tool in the world!
http://chibba.pgml.uga.edu/mcscan2/
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Restarting with -a option #44

Open conJUSTover opened 3 years ago

conJUSTover commented 3 years ago

Hi, thanks for developing MCScanX! I've found it of great use.

I have already ran one analysis using the -a option to stop after writing the .collinearity file, but now I realized that I could benefit from the .html files that are created downstream.

Is there a way to restart MCSCanX from the .collinearity file and only create the html files? Or do I need to redo the entire analysis to create the .html files?

Thanks! Justin