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wyp1125 / MCScanX

MCScanX: Multiple Collinearity Scan toolkit X version. The most popular synteny analysis tool in the world!
http://chibba.pgml.uga.edu/mcscan2/
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Example DATA not working #48

Open Dearbhaile opened 2 years ago

Dearbhaile commented 2 years ago

I have tried to use the sample data and it doesn't seem to work? Perhaps I am doing something wrong but I seem not to be able to get any collinearity.

gunjanpandey commented 1 year ago

@Dearbhaile You are not doing anything wrong. Example data does not work. Interestingly, the data format of the example files are not matching with the data format suggested.

AnezkaKar commented 12 months ago

Hi, I want to ask, do you by any chance have some example data, that match the format suggested? I'm struggling with this now, since in the description of the input data there doesn't seem to be a link between protein names in the blast file and the chromosome names in gff/bed file. And with data formated according to the example, the program also doesn't work...