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wyp1125 / MCScanX

MCScanX: Multiple Collinearity Scan toolkit X version. The most popular synteny analysis tool in the world!
http://chibba.pgml.uga.edu/mcscan2/
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MCscanx circle_plotter program and dual_synteny_plotter program can not produce a figure #9

Open Arvinlike opened 6 years ago

Arvinlike commented 6 years ago

I have done ./MCScanX dir/xyz , and draw a dot.plot successfully with the data produced from ./MCScanX. However , when I draw the fig with circle_plotter program and dual_synteny_plotte ,its make wrong . the error information like this:

image

Arvinlike commented 6 years ago

Can u help me to solve this problem , thank you .

liufy11 commented 5 years ago

I draw a dot.plot successfully too ,but with the same data I can only draw circle picture with chromosomes of one specie , and I failed to get circle picture when I input chromosomes of two species in circle.ctl
the error information like this:

http://github.com/liufy11/MCScan/blob/master/MCScan.png

shangshanzhizhe commented 5 years ago

@liufy11 How did you solve the problem?