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wzthu / Rbowtie2

Bioconductor package: an R wrapper for Bowtie2 and AdapterRemoval
https://www.bioconductor.org/packages/release/bioc/html/Rbowtie2.html
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escape file path to bt2index. #5

Closed jsun closed 2 years ago

jsun commented 2 years ago

bowtie2 command does not start when the path to the bt2index containing spaces, use shQuote to escape the space.