Because of the size of Data Distillery, we need relationship indexes. The relationship index was introduced in v4.3 of neo4. The standard neo4j image for HuBMAP is at v 4.2.5, and there is currently no plan to upgrade neo4j for HuBMAP.
Solution
Create a new version of the UBKG Docker distribution architecture to support Data Distillery. This would include:
A new Docker image running neo4j with a version level of at least 4.3.
Cypher commands to create relationship indexes in the new version, but not the current version.
A way for the build script to determine the Docker image to use. This may require separate versions of the scripts or logic in the scripts--e.g., a version parameter.
Statement of problem
Because of the size of Data Distillery, we need relationship indexes. The relationship index was introduced in v4.3 of neo4. The standard neo4j image for HuBMAP is at v 4.2.5, and there is currently no plan to upgrade neo4j for HuBMAP.
Solution
Create a new version of the UBKG Docker distribution architecture to support Data Distillery. This would include: