issues occured while reproducing GeneCompass

xCompass-AI / GeneCompass

GeneCompass

https://xcompass-ai.github.io/GeneCompass/

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issues occured while reproducing GeneCompass #7

Closed QingJun3 closed 5 days ago

QingJun3 commented 6 days ago

Hello, I am trying to reproduce the GeneCompass paper you published, but I have encountered some issues during the process.

As shown in the figure, the specific problem is that when I load the token_dictionary, I receive the error _pickle.UnpicklingError: invalid load key, 'v'.

I would like to ask if you could provide some suggestions for how to resolve this issue, or possibly provide the environment image that you used during your runs.

QingJun3 commented 5 days ago

I have resolved the issue. It seems that the .pickle files cloned directly via git were incomplete. I downloaded all the pickle files in the prior_knowledge/ directory separately, and that solved the problem.