Closed furqan915 closed 3 years ago
The second argument date
to bactdate
needs to be a vector, not a data frame. If there is no names(date)
then this vector is assumed to be in the same order as tree$tip.label
. If there are names(date)
then they need to be the same as the tree$tip.label
but do not need to be in the same order.
Hi, I am new to this work. I am trying to perform a core genome analysis of some bacterial strains. I have built a tree using Iqtree with GTR+G3 model. Now I need to use bacdating to date my tree. I have used following commands
but the last command returns an error
Please help me in this regard Thanks