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xenopus-anatomy / xao

XAO represents the anatomy and development of the African frogs Xenopus laevis and X. tropicalis.
http://www.xenbase.org/
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Update .obo file #60

Closed erik-whiting closed 2 years ago

erik-whiting commented 2 years ago

Related to https://github.com/OBOFoundry/OBOFoundry.github.io/issues/2149

What this Does

Applies the annotation property has ontology root term (IAO:0000700) to

Why this is helpful

the Ontology Lookup Service uses this to help better display ontologies if the terms mentioned above are ever aligned with an upper ontology like BFO, it still will be the thing shown on OLS as the "root" this will be generally useful for things like alignment with COB since it makes it easier to figure out where the work will be

cc @matentzn and @cthoyt

erik-whiting commented 2 years ago

@matentzn / @cthoyt is this one right? This appears to have two root terms in the lookup service so I updated both, just in the .obo file.

cthoyt commented 2 years ago

lgtm. don't forget to check https://cthoyt.com/cob-root-analysis/ as well, sometimes it might be different from what OLS says. Also, you should check the issue trackers and other PRs before doing a PR just in case there are already relevant discussions (e.g., #59 in this repo)