xflouris / libpll

Phylogenetic Likelihood Library
GNU Affero General Public License v3.0
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test odd states with model optimization in exp branch #70

Closed xflouris closed 8 years ago

xflouris commented 8 years ago

When having an odd number of states, the PMatrix is allocated as a matrix of size states * states_padded, i.e. states rows, each of states_padded columns.

eigen-vectors and inverse EV are now square matrices (states*states).

Keep this in mind when migrating the changes to the dev branch.

ddarriba commented 8 years ago

Done