xhyccc / beast-mcmc

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BEAUTi does not generate a valid starting tree when hard bounds on some nodes are specified in the prior #12

Closed GoogleCodeExporter closed 9 years ago

GoogleCodeExporter commented 9 years ago
What steps will reproduce the problem?
1. Load some data into BEAUTi.
2. Create a taxon set in the Taxa tab
2. Create a uniform prior with bounds of 10 and 100 on the tMRCA of the taxon 
set
3. Run BEAST on the generated BEAST XML file.

The expected output is that an MCMC analysis will begin. However what actually 
happens is an error 
occurs because the starting tree has zero likelihood.

Original issue reported on code.google.com by alexei.drummond on 22 Jan 2007 at 9:42

GoogleCodeExporter commented 9 years ago

Original comment by ramb...@gmail.com on 25 May 2007 at 3:21