Graph Embedding Evaluation / Code and Datasets for "Graph Embedding on Biomedical Networks: Methods, Applications, and Evaluations" (Bioinformatics 2020)
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ValueError: not enough values to unpack (expected 3, got 2) #15
Original Graph: nodes: 1133 edges: 5451
Training Graph: nodes: 1133 edges: 3874
Loading training graph for learning embedding...
Traceback (most recent call last):
File "main.py", line 198, in
more_main()
File "main.py", line 194, in more_main
main(parse_args())
File "main.py", line 126, in main
embedding_training(args, train_graph_filename)
File "F:\BioNEV-master\src\embed_train.py", line 25, in embedding_training
g = read_for_OpenNE(train_graph_filename, weighted=args.weighted)
File "F:\BioNEV-master\src\utils.py", line 17, in read_for_OpenNE
G.read_edgelist(filename=filename, weighted=weighted)
File "F:\BioNEV-master\src\OpenNE\graph.py", line 79, in read_edgelist
func(l)
File "F:\BioNEV-master\src\OpenNE\graph.py", line 65, in read_weighted
src, dst, w = l.split()
ValueError: not enough values to unpack (expected 3, got 2)
How to deal with? thank
I run SDNE,DeepWalk(openNE) wrong. as follow:
Original Graph: nodes: 1133 edges: 5451 Training Graph: nodes: 1133 edges: 3874 Loading training graph for learning embedding... Traceback (most recent call last): File "main.py", line 198, in
more_main()
File "main.py", line 194, in more_main
main(parse_args())
File "main.py", line 126, in main
embedding_training(args, train_graph_filename)
File "F:\BioNEV-master\src\embed_train.py", line 25, in embedding_training
g = read_for_OpenNE(train_graph_filename, weighted=args.weighted)
File "F:\BioNEV-master\src\utils.py", line 17, in read_for_OpenNE
G.read_edgelist(filename=filename, weighted=weighted)
File "F:\BioNEV-master\src\OpenNE\graph.py", line 79, in read_edgelist
func(l)
File "F:\BioNEV-master\src\OpenNE\graph.py", line 65, in read_weighted
src, dst, w = l.split()
ValueError: not enough values to unpack (expected 3, got 2)
How to deal with? thank