fq.gz instead fastq.gz for input files doesnt work

[estolle]

Hi

I was just trying out Necat and experienced this error:

"2020-09-13 15:36:41 [WARNING] Unrecognized the suffix of /scratch/reads/P14702.nanoporeDNA/data/pass.5kb.fq.gz"

Apparently the input read files have to be named fastq.gz and fq.gz doesn't work.

I just wanted to leave this here so that other can find this information. If possible, perhaps a clarification in the manual could be helpful or more agnostic handling of file extentions.

[Ural-Yunusbaev]

I solved it this way: mv lib.fq.gz lib.fastq.gz

[xphab]

also: mv reads.fq reads.fastq