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xiaofengsong / IRESfinder

IRESfinder is a python package for the identification of RNA internal ribosome entry site in eukaryotic cell
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Input fasta is one line format. #3

Closed gnilihzeux closed 4 years ago

gnilihzeux commented 4 years ago

Hi, dear author. IRESfinder input fasta must be in one line for each entry, which you should add to your 'Readme', otherwise result will not consistent with your example.

such as

>id1
CCGAGGTC...TGC

but not

>id1
CCGAGGTC...
TGC
zhaodoctor commented 4 years ago

Thanks for reminding. We have modified the python scripts to make IRESfinder more compatible for fasta format files. Now, the fasta format file that one id followed by multiple sequence lines can be processed by IRESfinder.