I am very interested in using StairwayPlot2 for a study on a host-microbe system. Could I ask if the StairwayPlot2 method is appropriate to use for non-diploid systems? I have prepared the input files with folded SFSs and it seems to be running fine, though I want to make sure there are not underlying assumptions that I am missing.
Dear Xiaoming,
I am very interested in using StairwayPlot2 for a study on a host-microbe system. Could I ask if the StairwayPlot2 method is appropriate to use for non-diploid systems? I have prepared the input files with folded SFSs and it seems to be running fine, though I want to make sure there are not underlying assumptions that I am missing.
Thank you, Corinna