GeneDMRs is an R package to detect the differentially methylated regions based on genes, gene body, CpG islands and gene body interacted with CpG island features.
Hi, could you please explain the format of methdata? It's chr, start, end and the rest is.. ? Also, do you suggest a specific tool to identify methylated regions because I'm using nanomethphase and the output format is a bit different then methdata, I have to reformat it.
Hi, could you please explain the format of methdata? It's chr, start, end and the rest is.. ? Also, do you suggest a specific tool to identify methylated regions because I'm using nanomethphase and the output format is a bit different then methdata, I have to reformat it.