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xiezhq / ISEScan

A python pipeline to identify IS (Insertion Sequence) elements in genome and metagenome
Apache License 2.0
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use options for removeShortIS and translateGenome instead of setting it on constant.py #16

Closed EricDeveaud closed 4 years ago

EricDeveaud commented 4 years ago

using values from constants.py breaks the ability to for user set removeShortIS and translateGenome when ISEScan is installed system wide.

on our cluster ISEScan is installed on a shared filesystem mounted read only.

so I had to hack ISEScan in order to provide to our user the ability to toggle the behaviour normaly controled by values from constants.py

regards

Eric