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xihaoli / STAARpipeline-Tutorial

The tutorial for performing single-/multi-trait association analysis of whole-genome/whole-exome sequencing (WGS/WES) studies using FAVORannotator, STAARpipeline and STAARpipelineSummary
GNU General Public License v3.0
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Is there any example file for test? #8

Closed SheaCheng2000 closed 1 year ago

SheaCheng2000 commented 1 year ago

Hi,

I am wondering is there any example file that I could use for test?

Thanks a lot!

Shea

xihaoli commented 1 year ago

Hi Shea,

Are you referring to testing the full STAARpipeline (including the steps of FAVORannotator)? If so, one example dataset for testing is the public 1000 Genomes Project dataset, where you can test for both FAVORannotator and STAARpipeline.

Best, Xihao

SheaCheng2000 commented 1 year ago

Hi Xihao,

Yes, I want to test the full STAARpipeline. Thanks for your recommendation and I will give a try :）

Shea