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xinehc / args_oap

ARGs-OAP: Online Analysis Pipeline for Antibiotic Resistance Genes Detection from Metagenomic Data Using an Integrated Structured ARG Database
MIT License
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Question for results of risk ranking #30

Open Rooobben opened 1 year ago

Rooobben commented 1 year ago

Hi, I wanted to download the results of the "Risk Ranking Version 3.0", but the web was 404. Can you solve it please? Thanks.

xinehc commented 1 year ago

The link should work now. https://smile.hku.hk/ARGs/dataset/riskranking_20220927_rankI_225.zip

Rooobben commented 1 year ago

Hello, the risk annotation of ARG subtypes is based on gene name, we want to correlate the abundance with risk rank for analysis, when several subtypes are annotated with different risk rank, can we directly merge the abundance and take the highest risk rank for analysis?