search

xinehc / args_oap

ARGs-OAP: Online Analysis Pipeline for Antibiotic Resistance Genes Detection from Metagenomic Data Using an Integrated Structured ARG Database
MIT License
36 stars 11 forks source link

Question about use of GreenGenes database #31

Open winnerk0624 opened 1 year ago

winnerk0624 commented 1 year ago

I see that this package uses the GreenGenes database of 16S rRNA genes. Depending on which version you're using, this database is potentially outdated. Could you let me know which version of GreenGenes this package uses? I would also suggest including this information in the README.

Thanks

xinehc commented 12 months ago

Greengenes 13_8 85%