Error running custom database

[iMay1314]

I used the protein files provided by bacmet database to build a custom database of args_oap, extracted the GI_number of the protein database fasta file according to the tips of github,

and then used the annotation file to build structure.txt.

I have since changed the column names to level1, level2, level3. There was no problem in running stageone. The problem was stagetwo.

[xinehc]

Hi,

GI are automatically stored as integers so the two files cannot be merged. This one should fix it: https://github.com/xinehc/args_oap/commit/d465b844dfa1a2a304cb7d4364f32159c2227c59

Alternatively, add a fake string line (e.g. '-\t-\t-') at the end of your structure file should also work.

[iMay1314]

Hi,

GI are automatically stored as integers so the two files cannot be merged. This one should fix it: d465b84

Alternatively, add a fake string line (e.g. '-\t-\t-') at the end of your structure file should also work. Do I need to add a fake string line (e.g. '-\t-\t-') to structure.txt?

[xinehc]

If you don't want to install the latest commit then yes.

I didn't test it but it should work.

[iMay1314]

If you don't want to install the latest commit then yes.

I didn't test it but it should work.

It has been solved with your help. Thank you very much.