more details about the output file

xinehc / args_oap

ARGs-OAP: Online Analysis Pipeline for Antibiotic Resistance Genes Detection from Metagenomic Data Using an Integrated Structured ARG Database

MIT License

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Open ML198 opened 6 months ago

ML198 commented 6 months ago

hi,

I would like to know what is meaning of "count" and "copy" in the output file 'blastout.filtered.txt'.

thank you

xinehc commented 6 months ago

count -> read counts copy -> gene copies (sum of genes' coverage)

ML198 commented 5 months ago

Thank you for your reply