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xjtu-omics / msisensor-pro

Microsatellite Instability (MSI) detection using high-throughput sequencing data.
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Scan output #53

Closed yazbeck closed 1 year ago

yazbeck commented 1 year ago

Hi, Is the .list output of the scan command, is zero or 1 -based?

"msisensor-pro scan -d /path/to/reference.fa -o /path/to/reference.list"

Thanks

yazbeck commented 1 year ago

As per the developer, the output file is 0-based.