Open Bang9suK opened 4 weeks ago
Running the msi module returns the following:
`hwanho@linux:/mnt/bigHDD/resource/ref_and_tools/tools/msisensor-pro$ ./binary/msisensor-pro msi -d ./Homo_sapiens.GRCh38.dna.primary_assembly.msi.list -n ./test/460NT-DGRCh38_aligned.bam -t ./test/460TT-D__GRCh38_aligned.bam -o ./test/ msi -d ./Homo_sapiens.GRCh38.dna.primary_assembly.msi.list -n ./test/460NT-DGRCh38_aligned.bam -t ./test/460TT-D__GRCh38_aligned.bam -o ./test/ Start at: Tue Jun 11 15:34:56 2024
loading homopolymer and microsatellite sites ...
Total loading windows: 5895
Total loading homopolymer and microsatellites: 1800173
failed to open output files to write !`
This happens even when I run the command with sudo or as root user.
OS is Ubuntu 18.04 LTS
Running the msi module returns the following:
`hwanho@linux:/mnt/bigHDD/resource/ref_and_tools/tools/msisensor-pro$ ./binary/msisensor-pro msi -d ./Homo_sapiens.GRCh38.dna.primary_assembly.msi.list -n ./test/460NT-DGRCh38_aligned.bam -t ./test/460TT-D__GRCh38_aligned.bam -o ./test/ msi -d ./Homo_sapiens.GRCh38.dna.primary_assembly.msi.list -n ./test/460NT-DGRCh38_aligned.bam -t ./test/460TT-D__GRCh38_aligned.bam -o ./test/ Start at: Tue Jun 11 15:34:56 2024
loading homopolymer and microsatellite sites ...
Total loading windows: 5895
Total loading homopolymer and microsatellites: 1800173
failed to open output files to write !`
This happens even when I run the command with sudo or as root user.
OS is Ubuntu 18.04 LTS