xmuhuanglab / eNet

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If this program could be used for scRNA-seq data and bulk ATAC-seq together to infer the hub enhancer? #14

Open bioinformaticspcj opened 1 year ago

bioinformaticspcj commented 1 year ago

Dear the authors,

Thank you for the useful software. However, in many situations, it is difficult to obtain scATAC-seq data, especially for some small tissues such as limb bud. I wonder if I can use eNet to identify hub enhancers using only scRNA-seq data and bulk ATAC-seq data together?

Best, Changjun Peng