Related open science project: Open Pediatric Brain Tumor Atlas

xomicsdatascience / transcriptome-proteome-nas-manubot

Creative Commons Attribution 4.0 International

5 stars 1 forks source link

Related open science project: Open Pediatric Brain Tumor Atlas #3

Open agitter opened 4 months ago

agitter commented 4 months ago

Cool project, I hope you attract many contributors.

The Open Pediatric Brain Tumor Atlas was another Manubot-coordinated project where anyone could contribute to the data analysis. You may be able to benefit from their lessons learned:

Manubot GitHub repo: https://github.com/AlexsLemonade/OpenPBTA-manuscript
Analysis GitHub repo: https://github.com/AlexsLemonade/OpenPBTA-analysis
Journal publication: https://doi.org/10.1016/j.xgen.2023.100340

CCranney commented 4 months ago

Thank you for your interest and feedback @agitter! This looks great, we'll take a look. I'll keep this issue open to track possible lessons learned from reviewing that project.

jessegmeyerlab commented 4 months ago

I remember seeing this as a data analysis repo a long while back - I didn't realize they used manubot on their paper writing - thanks for reminding me of this Tony - very cool!