idpicker/find_valid_proteins returns different ordering across repetition

xomicsdatascience / zoDIAq

Cosine Similarity Optimization for DIA qualitative and quantitative analysis

MIT License

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idpicker/find_valid_proteins returns different ordering across repetition #44

Closed AlexandreHutton closed 1 year ago

AlexandreHutton commented 2 years ago

The function find_valid_proteins returns values in a different order when run multiple times with the same settings. This causes the _proteinFDR.csv and _allCVs.csv files to have different orderings in the leadingProtein column and nowhere else.

CCranney commented 1 year ago

Made a fix for what I believe is the issue described, see the above PR.