Unable to reproduce E16.5 demonstration

xu-lab / SINCERA

An R implementation of the SINCERA pipeline for single cell RNA-seq profiling analysis

https://research.cchmc.org/pbge/sincera.html

GNU General Public License v3.0

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Unable to reproduce E16.5 demonstration #4

Open juugii opened 6 years ago

juugii commented 6 years ago

Hello,

Following the E16.5 demonstration tutorial, an error occurs during the PCA step (mouselung.e16.5.R @ line 60):

Error in expr[pc.genes, ] : indice outside limits

Session info ------------------------------------------------------------------ setting value
version R version 3.4.4 (2018-03-15) system x86_64, linux-gnu

SINCERA * 0.99.0 2018-04-19 Github (xu-lab/SINCERA@ed5800e)

Best regards.

minzheguo commented 6 years ago

Hi @juugii, sorry for the late reply. I fixed the incorrect exprs() function calling issue due to the update of the dplyr package. Can you try again?

Please let me know if the problem remains.

Thank you.