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xuechunxu / DiTing

DiTing: A pipeline to infer and compare biogeochemical pathways in metagenomic data
GNU General Public License v3.0
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New custom catabolism #6

Open ppuchaicela opened 2 years ago

ppuchaicela commented 2 years ago

Hello

Thanks for the exceptional contribution of the pipelines I'm trying prove my own cycle of catabolism, It's possible do it? and how? .

Thanks for your advice....

xuechunxu commented 2 years ago

Hi,

Yes, DiTing will create a table containing the relative abundance of each KEGG Orthologs among the samples. You can search for your interested KEGG Orthologs. The result also contains protein sequences and their abundances. You can search for your interested proteins using the blast or other tools.

Best Chunxu