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xuranw / MuSiC

Multi-subject Single Cell Deconvolution
https://github.com/xuranw/MuSiC
GNU General Public License v3.0
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music_prop.cluster: Error in nnls(D.weight, Y.weight) NA/NaN/Inf... #38

Open OrionT-ox opened 4 years ago

OrionT-ox commented 4 years ago

Hi Xuran,

Thank you for writing this package! I was trying to run music_prop.cluster on some single cell data, as per the tutorial and using the bulk.construct function as well. I've run the same data on music_prop and get a proper result. Unfortunately, when I go to run it after identifying clusters and getting a list of the variably expressed genes for each group, I end up with the error message: Error in nnls(D.weight, Y.weight): NA/NaN/Inf in foreign function call (arg1):

image

Would you have any suggestions as to how to get around this?

Thank you! Orion

stephen-siecinski commented 3 years ago

Hi Orion,

Encountering the same issue as well, did you ever figure out how to resolve it?

woshiyangsi commented 3 years ago

Hi Orion,

Encountering the same issue as well, did you ever figure out how to resolve it?