xuxiaohan / MSNE

A network embedding based method for partial multi-omics integration in cancer subtyping
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error when running MSNE command #2

Open annarerra opened 1 year ago

annarerra commented 1 year ago

Hello,

I try to reproduce your code image but i receive an error

error1 error2

Any idea?

Thank you!

xuxiaohan commented 1 year ago

Thanks for your attention! This issue is caused by the package ‘genesim’ modifying this parameter 'size' to 'vector_size' in the version gensim>=4.0.0 You can install a older version gensim (any version <4.0.0) to avoid this problem. for example, just run pip install gensim==3.8.0

annarerra commented 1 year ago

It worked! Thank you :)