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xypan1232 / DislncRF

Inferring disease-associated lncRNAs using tissue expression profiles
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training data is available? #1

Open lihuinian opened 5 years ago

lihuinian commented 5 years ago

Hi, Is it possible to get the training data of lncRNA-disease used in your study? thanks.

xypan1232 commented 5 years ago

can you give me you mail, and i will send it to you. it should be noted that lncRNA-disease is not involved in model training, and it is an independent testing set.

xypan1232 commented 5 years ago

I uploaded data_disease_doid.txt to this github, you can download it.

xypan1232 commented 4 years ago

disease-lncRNA pairs are data_disease_doid.txt in this github, but in this study, we only use disease-lncRNA as the test set, the trianing data is disease-associated PCGs, which is avaialble at https://github.com/xypan1232/DimiG/blob/master/data/human_disease_integrated_full.zip

JappyPing commented 4 years ago

disease-lncRNA pairs are data_disease_doid.txt in this github, but in this study, we only use disease-lncRNA as the test set, the trianing data is disease-associated PCGs, which is avaialble at https://github.com/xypan1232/DimiG/blob/master/data/human_disease_integrated_full.zip

Thank you very much, Dr. Pan.

meddoc0 commented 4 years ago

Hi , Dr.Pan Could you send me the dataset and all the necessary file data about this project ? I couldn't find the files like string_9606___10_all_T.tsv , consolidated_all.tsv and so on. My email is x2754728418@gmail.com , many Thanks!