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yampelo / beagle

Beagle is an incident response and digital forensics tool which transforms security logs and data into graphs.
MIT License
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Getting [Error] in gunicorn/arbiter.py - gunicorn.errors.HaltServer: <HaltServer 'Worker failed to boot.' 3> #31

Closed Syedabeer closed 5 years ago

Syedabeer commented 5 years ago

Hello, I am trying to use beagle on windows using Docker Tools. So far I was able to run the code were graph table is created. However, afterwards I am witnessing the above same error all the time, even-though I have remove the db and containers but still i am unable to get rid of this issue.

Please find the below error logs:

$ docker run -v "$PWD/data/beagle":"/data/beagle" -p 8000:8000 yampelo/beagle:latest [2019-04-18 12:53:33 +0000] [1] [INFO] Starting gunicorn 19.9.0 [2019-04-18 12:53:33 +0000] [1] [INFO] Listening at: http://0.0.0.0:8000 (1) [2019-04-18 12:53:33 +0000] [1] [INFO] Using worker: sync [2019-04-18 12:53:33 +0000] [8] [INFO] Booting worker with pid: 8 [2019-04-18 12:53:33 +0000] [9] [INFO] Booting worker with pid: 9 [2019-04-18 12:53:33 +0000] [10] [INFO] Booting worker with pid: 10

[2019-04-18 12:53:33 +0000] [11] [INFO] Booting worker with pid: 11 [2019-04-18 12:53:33 +0000] [12] [INFO] Booting worker with pid: 12 [2019-04-18 12:53:33 +0000] [13] [INFO] Booting worker with pid: 13 [2019-04-18 12:53:33 +0000] [14] [INFO] Booting worker with pid: 14 [2019-04-18 12:53:33 +0000] [15] [INFO] Booting worker with pid: 15 [2019-04-18 12:53:33 +0000] [16] [INFO] Booting worker with pid: 16 [2019-04-18 12:53:33 +0000] [17] [INFO] Booting worker with pid: 17 [2019-04-18 12:53:33 +0000] [18] [INFO] Booting worker with pid: 18 [2019-04-18 12:53:33 +0000] [19] [INFO] Booting worker with pid: 19 [2019-04-18 12:53:52 +0000] [9] [ERROR] Exception in worker process Traceback (most recent call last): File "/usr/local/lib/python3.6/site-packages/sqlalchemy/engine/base.py", line 1244, in _execute_context cursor, statement, parameters, context File "/usr/local/lib/python3.6/site-packages/sqlalchemy/engine/default.py", line 552, in do_execute cursor.execute(statement, parameters) sqlite3.OperationalError: table graph already exists

The above exception was the direct cause of the following exception:

Traceback (most recent call last): File "/usr/local/lib/python3.6/site-packages/gunicorn/arbiter.py", line 583, in spawn_worker worker.init_process() File "/usr/local/lib/python3.6/site-packages/gunicorn/workers/base.py", line 129, in init_process self.load_wsgi() File "/usr/local/lib/python3.6/site-packages/gunicorn/workers/base.py", line 138, in load_wsgi self.wsgi = self.app.wsgi() File "/usr/local/lib/python3.6/site-packages/gunicorn/app/base.py", line 67, in wsgi self.callable = self.load() File "/usr/local/lib/python3.6/site-packages/gunicorn/app/wsgiapp.py", line 52, in load return self.load_wsgiapp() File "/usr/local/lib/python3.6/site-packages/gunicorn/app/wsgiapp.py", line 41, in load_wsgiapp return util.import_app(self.app_uri) File "/usr/local/lib/python3.6/site-packages/gunicorn/util.py", line 350, in import_app import(module) File "/opt/beagle/beagle/web/wsgi.py", line 3, in app = create_app() File "/opt/beagle/beagle/web/server.py", line 48, in create_app db.create_all() File "/usr/local/lib/python3.6/site-packages/flask_sqlalchemy/init.py", line 963, in create_all self._execute_for_all_tables(app, bind, 'create_all') File "/usr/local/lib/python3.6/site-packages/flask_sqlalchemy/init.py", line 955, in _execute_for_all_tables op(bind=self.get_engine(app, bind), extra) File "/usr/local/lib/python3.6/site-packages/sqlalchemy/sql/schema.py", line 4287, in create_all ddl.SchemaGenerator, self, checkfirst=checkfirst, tables=tables File "/usr/local/lib/python3.6/site-packages/sqlalchemy/engine/base.py", line 2033, in _run_visitor conn._run_visitor(visitorcallable, element, kwargs) File "/usr/local/lib/python3.6/site-packages/sqlalchemy/engine/base.py", line 1607, in _run_visitor visitorcallable(self.dialect, self, kwargs).traverse_single(element) File "/usr/local/lib/python3.6/site-packages/sqlalchemy/sql/visitors.py", line 131, in traverse_single return meth(obj, kw) File "/usr/local/lib/python3.6/site-packages/sqlalchemy/sql/ddl.py", line 781, in visit_metadata _is_metadata_operation=True, File "/usr/local/lib/python3.6/site-packages/sqlalchemy/sql/visitors.py", line 131, in traverse_single return meth(obj, **kw) File "/usr/local/lib/python3.6/site-packages/sqlalchemy/sql/ddl.py", line 826, in visit_table include_foreign_key_constraints, File "/usr/local/lib/python3.6/site-packages/sqlalchemy/engine/base.py", line 988, in execute return meth(self, multiparams, params) File "/usr/local/lib/python3.6/site-packages/sqlalchemy/sql/ddl.py", line 72, in _execute_on_connection return connection._execute_ddl(self, multiparams, params) File "/usr/local/lib/python3.6/site-packages/sqlalchemy/engine/base.py", line 1050, in _execute_ddl compiled, File "/usr/local/lib/python3.6/site-packages/sqlalchemy/engine/base.py", line 1248, in _execute_context e, statement, parameters, cursor, context File "/usr/local/lib/python3.6/site-packages/sqlalchemy/engine/base.py", line 1466, in _handle_dbapi_exception util.raise_from_cause(sqlalchemy_exception, exc_info) File "/usr/local/lib/python3.6/site-packages/sqlalchemy/util/compat.py", line 383, in raise_from_cause reraise(type(exception), exception, tb=exc_tb, cause=cause) File "/usr/local/lib/python3.6/site-packages/sqlalchemy/util/compat.py", line 128, in reraise raise value.with_traceback(tb) File "/usr/local/lib/python3.6/site-packages/sqlalchemy/engine/base.py", line 1244, in _execute_context cursor, statement, parameters, context File "/usr/local/lib/python3.6/site-packages/sqlalchemy/engine/default.py", line 552, in do_execute cursor.execute(statement, parameters) sqlalchemy.exc.OperationalError: (sqlite3.OperationalError) table graph already exists [SQL: CREATE TABLE graph ( id INTEGER NOT NULL, sha256 VARCHAR(255) NOT NULL, meta VARCHAR NOT NULL, category VARCHAR(255) NOT NULL, comment VARCHAR(255), file_path VARCHAR(255) NOT NULL, PRIMARY KEY (id), UNIQUE (sha256), UNIQUE (file_path) )

] (Background on this error at: http://sqlalche.me/e/e3q8) [2019-04-18 12:53:52 +0000] [15] [ERROR] Exception in worker process Traceback (most recent call last): File "/usr/local/lib/python3.6/site-packages/sqlalchemy/engine/base.py", line 1244, in _execute_context cursor, statement, parameters, context File "/usr/local/lib/python3.6/site-packages/sqlalchemy/engine/default.py", line 552, in do_execute cursor.execute(statement, parameters) sqlite3.OperationalError: table graph already exists

The above exception was the direct cause of the following exception:

Traceback (most recent call last): File "/usr/local/lib/python3.6/site-packages/gunicorn/arbiter.py", line 583, in spawn_worker worker.init_process() File "/usr/local/lib/python3.6/site-packages/gunicorn/workers/base.py", line 129, in init_process self.load_wsgi() File "/usr/local/lib/python3.6/site-packages/gunicorn/workers/base.py", line 138, in load_wsgi self.wsgi = self.app.wsgi() File "/usr/local/lib/python3.6/site-packages/gunicorn/app/base.py", line 67, in wsgi self.callable = self.load() File "/usr/local/lib/python3.6/site-packages/gunicorn/app/wsgiapp.py", line 52, in load return self.load_wsgiapp() File "/usr/local/lib/python3.6/site-packages/gunicorn/app/wsgiapp.py", line 41, in load_wsgiapp return util.import_app(self.app_uri) File "/usr/local/lib/python3.6/site-packages/gunicorn/util.py", line 350, in import_app import(module) File "/opt/beagle/beagle/web/wsgi.py", line 3, in app = create_app() File "/opt/beagle/beagle/web/server.py", line 48, in create_app db.create_all() File "/usr/local/lib/python3.6/site-packages/flask_sqlalchemy/init.py", line 963, in create_all self._execute_for_all_tables(app, bind, 'create_all') File "/usr/local/lib/python3.6/site-packages/flask_sqlalchemy/init.py", line 955, in _execute_for_all_tables op(bind=self.get_engine(app, bind), extra) File "/usr/local/lib/python3.6/site-packages/sqlalchemy/sql/schema.py", line 4287, in create_all ddl.SchemaGenerator, self, checkfirst=checkfirst, tables=tables File "/usr/local/lib/python3.6/site-packages/sqlalchemy/engine/base.py", line 2033, in _run_visitor conn._run_visitor(visitorcallable, element, kwargs) File "/usr/local/lib/python3.6/site-packages/sqlalchemy/engine/base.py", line 1607, in _run_visitor visitorcallable(self.dialect, self, kwargs).traverse_single(element) File "/usr/local/lib/python3.6/site-packages/sqlalchemy/sql/visitors.py", line 131, in traverse_single return meth(obj, kw) File "/usr/local/lib/python3.6/site-packages/sqlalchemy/sql/ddl.py", line 781, in visit_metadata _is_metadata_operation=True, File "/usr/local/lib/python3.6/site-packages/sqlalchemy/sql/visitors.py", line 131, in traverse_single return meth(obj, **kw) File "/usr/local/lib/python3.6/site-packages/sqlalchemy/sql/ddl.py", line 826, in visit_table include_foreign_key_constraints, File "/usr/local/lib/python3.6/site-packages/sqlalchemy/engine/base.py", line 988, in execute return meth(self, multiparams, params) File "/usr/local/lib/python3.6/site-packages/sqlalchemy/sql/ddl.py", line 72, in _execute_on_connection return connection._execute_ddl(self, multiparams, params) File "/usr/local/lib/python3.6/site-packages/sqlalchemy/engine/base.py", line 1050, in _execute_ddl compiled, File "/usr/local/lib/python3.6/site-packages/sqlalchemy/engine/base.py", line 1248, in _execute_context e, statement, parameters, cursor, context File "/usr/local/lib/python3.6/site-packages/sqlalchemy/engine/base.py", line 1466, in _handle_dbapi_exception util.raise_from_cause(sqlalchemy_exception, exc_info) File "/usr/local/lib/python3.6/site-packages/sqlalchemy/util/compat.py", line 383, in raise_from_cause reraise(type(exception), exception, tb=exc_tb, cause=cause) File "/usr/local/lib/python3.6/site-packages/sqlalchemy/util/compat.py", line 128, in reraise raise value.with_traceback(tb) File "/usr/local/lib/python3.6/site-packages/sqlalchemy/engine/base.py", line 1244, in _execute_context cursor, statement, parameters, context File "/usr/local/lib/python3.6/site-packages/sqlalchemy/engine/default.py", line 552, in do_execute cursor.execute(statement, parameters) sqlalchemy.exc.OperationalError: (sqlite3.OperationalError) table graph already exists [SQL: CREATE TABLE graph ( id INTEGER NOT NULL, sha256 VARCHAR(255) NOT NULL, meta VARCHAR NOT NULL, category VARCHAR(255) NOT NULL, comment VARCHAR(255), file_path VARCHAR(255) NOT NULL, PRIMARY KEY (id), UNIQUE (sha256), UNIQUE (file_path) )

] (Background on this error at: http://sqlalche.me/e/e3q8) [2019-04-18 12:53:52 +0000] [18] [ERROR] Exception in worker process Traceback (most recent call last): File "/usr/local/lib/python3.6/site-packages/sqlalchemy/engine/base.py", line 1244, in _execute_context cursor, statement, parameters, context File "/usr/local/lib/python3.6/site-packages/sqlalchemy/engine/default.py", line 552, in do_execute cursor.execute(statement, parameters) sqlite3.OperationalError: table graph already exists

The above exception was the direct cause of the following exception:

Traceback (most recent call last): File "/usr/local/lib/python3.6/site-packages/gunicorn/arbiter.py", line 583, in spawn_worker worker.init_process() File "/usr/local/lib/python3.6/site-packages/gunicorn/workers/base.py", line 129, in init_process self.load_wsgi() File "/usr/local/lib/python3.6/site-packages/gunicorn/workers/base.py", line 138, in load_wsgi self.wsgi = self.app.wsgi() File "/usr/local/lib/python3.6/site-packages/gunicorn/app/base.py", line 67, in wsgi self.callable = self.load() File "/usr/local/lib/python3.6/site-packages/gunicorn/app/wsgiapp.py", line 52, in load return self.load_wsgiapp() File "/usr/local/lib/python3.6/site-packages/gunicorn/app/wsgiapp.py", line 41, in load_wsgiapp return util.import_app(self.app_uri) File "/usr/local/lib/python3.6/site-packages/gunicorn/util.py", line 350, in import_app import(module) File "/opt/beagle/beagle/web/wsgi.py", line 3, in app = create_app() File "/opt/beagle/beagle/web/server.py", line 48, in create_app db.create_all() File "/usr/local/lib/python3.6/site-packages/flask_sqlalchemy/init.py", line 963, in create_all self._execute_for_all_tables(app, bind, 'create_all') File "/usr/local/lib/python3.6/site-packages/flask_sqlalchemy/init.py", line 955, in _execute_for_all_tables op(bind=self.get_engine(app, bind), extra) File "/usr/local/lib/python3.6/site-packages/sqlalchemy/sql/schema.py", line 4287, in create_all ddl.SchemaGenerator, self, checkfirst=checkfirst, tables=tables File "/usr/local/lib/python3.6/site-packages/sqlalchemy/engine/base.py", line 2033, in _run_visitor conn._run_visitor(visitorcallable, element, kwargs) File "/usr/local/lib/python3.6/site-packages/sqlalchemy/engine/base.py", line 1607, in _run_visitor visitorcallable(self.dialect, self, kwargs).traverse_single(element) File "/usr/local/lib/python3.6/site-packages/sqlalchemy/sql/visitors.py", line 131, in traverse_single return meth(obj, kw) File "/usr/local/lib/python3.6/site-packages/sqlalchemy/sql/ddl.py", line 781, in visit_metadata _is_metadata_operation=True, File "/usr/local/lib/python3.6/site-packages/sqlalchemy/sql/visitors.py", line 131, in traverse_single return meth(obj, **kw) File "/usr/local/lib/python3.6/site-packages/sqlalchemy/sql/ddl.py", line 826, in visit_table include_foreign_key_constraints, File "/usr/local/lib/python3.6/site-packages/sqlalchemy/engine/base.py", line 988, in execute return meth(self, multiparams, params) File "/usr/local/lib/python3.6/site-packages/sqlalchemy/sql/ddl.py", line 72, in _execute_on_connection return connection._execute_ddl(self, multiparams, params) File "/usr/local/lib/python3.6/site-packages/sqlalchemy/engine/base.py", line 1050, in _execute_ddl compiled, File "/usr/local/lib/python3.6/site-packages/sqlalchemy/engine/base.py", line 1248, in _execute_context e, statement, parameters, cursor, context File "/usr/local/lib/python3.6/site-packages/sqlalchemy/engine/base.py", line 1466, in _handle_dbapi_exception util.raise_from_cause(sqlalchemy_exception, exc_info) File "/usr/local/lib/python3.6/site-packages/sqlalchemy/util/compat.py", line 383, in raise_from_cause reraise(type(exception), exception, tb=exc_tb, cause=cause) File "/usr/local/lib/python3.6/site-packages/sqlalchemy/util/compat.py", line 128, in reraise raise value.with_traceback(tb) File "/usr/local/lib/python3.6/site-packages/sqlalchemy/engine/base.py", line 1244, in _execute_context cursor, statement, parameters, context File "/usr/local/lib/python3.6/site-packages/sqlalchemy/engine/default.py", line 552, in do_execute cursor.execute(statement, parameters) sqlalchemy.exc.OperationalError: (sqlite3.OperationalError) table graph already exists [SQL: CREATE TABLE graph ( id INTEGER NOT NULL, sha256 VARCHAR(255) NOT NULL, meta VARCHAR NOT NULL, category VARCHAR(255) NOT NULL, comment VARCHAR(255), file_path VARCHAR(255) NOT NULL, PRIMARY KEY (id), UNIQUE (sha256), UNIQUE (file_path) )

] (Background on this error at: http://sqlalche.me/e/e3q8) [2019-04-18 12:53:52 +0000] [12] [ERROR] Exception in worker process Traceback (most recent call last): File "/usr/local/lib/python3.6/site-packages/sqlalchemy/engine/base.py", line 1244, in _execute_context cursor, statement, parameters, context File "/usr/local/lib/python3.6/site-packages/sqlalchemy/engine/default.py", line 552, in do_execute cursor.execute(statement, parameters) sqlite3.OperationalError: table graph already exists

The above exception was the direct cause of the following exception:

Traceback (most recent call last): File "/usr/local/lib/python3.6/site-packages/gunicorn/arbiter.py", line 583, in spawn_worker worker.init_process() File "/usr/local/lib/python3.6/site-packages/gunicorn/workers/base.py", line 129, in init_process self.load_wsgi() File "/usr/local/lib/python3.6/site-packages/gunicorn/workers/base.py", line 138, in load_wsgi self.wsgi = self.app.wsgi() File "/usr/local/lib/python3.6/site-packages/gunicorn/app/base.py", line 67, in wsgi self.callable = self.load() File "/usr/local/lib/python3.6/site-packages/gunicorn/app/wsgiapp.py", line 52, in load return self.load_wsgiapp() File "/usr/local/lib/python3.6/site-packages/gunicorn/app/wsgiapp.py", line 41, in load_wsgiapp return util.import_app(self.app_uri) File "/usr/local/lib/python3.6/site-packages/gunicorn/util.py", line 350, in import_app import(module) File "/opt/beagle/beagle/web/wsgi.py", line 3, in app = create_app() File "/opt/beagle/beagle/web/server.py", line 48, in create_app db.create_all() File "/usr/local/lib/python3.6/site-packages/flask_sqlalchemy/init.py", line 963, in create_all self._execute_for_all_tables(app, bind, 'create_all') File "/usr/local/lib/python3.6/site-packages/flask_sqlalchemy/init.py", line 955, in _execute_for_all_tables op(bind=self.get_engine(app, bind), extra) File "/usr/local/lib/python3.6/site-packages/sqlalchemy/sql/schema.py", line 4287, in create_all ddl.SchemaGenerator, self, checkfirst=checkfirst, tables=tables File "/usr/local/lib/python3.6/site-packages/sqlalchemy/engine/base.py", line 2033, in _run_visitor conn._run_visitor(visitorcallable, element, kwargs) File "/usr/local/lib/python3.6/site-packages/sqlalchemy/engine/base.py", line 1607, in _run_visitor visitorcallable(self.dialect, self, kwargs).traverse_single(element) File "/usr/local/lib/python3.6/site-packages/sqlalchemy/sql/visitors.py", line 131, in traverse_single return meth(obj, kw) File "/usr/local/lib/python3.6/site-packages/sqlalchemy/sql/ddl.py", line 781, in visit_metadata _is_metadata_operation=True, File "/usr/local/lib/python3.6/site-packages/sqlalchemy/sql/visitors.py", line 131, in traverse_single return meth(obj, **kw) File "/usr/local/lib/python3.6/site-packages/sqlalchemy/sql/ddl.py", line 826, in visit_table include_foreign_key_constraints, File "/usr/local/lib/python3.6/site-packages/sqlalchemy/engine/base.py", line 988, in execute return meth(self, multiparams, params) File "/usr/local/lib/python3.6/site-packages/sqlalchemy/sql/ddl.py", line 72, in _execute_on_connection return connection._execute_ddl(self, multiparams, params) File "/usr/local/lib/python3.6/site-packages/sqlalchemy/engine/base.py", line 1050, in _execute_ddl compiled, File "/usr/local/lib/python3.6/site-packages/sqlalchemy/engine/base.py", line 1248, in _execute_context e, statement, parameters, cursor, context File "/usr/local/lib/python3.6/site-packages/sqlalchemy/engine/base.py", line 1466, in _handle_dbapi_exception util.raise_from_cause(sqlalchemy_exception, exc_info) File "/usr/local/lib/python3.6/site-packages/sqlalchemy/util/compat.py", line 383, in raise_from_cause reraise(type(exception), exception, tb=exc_tb, cause=cause) File "/usr/local/lib/python3.6/site-packages/sqlalchemy/util/compat.py", line 128, in reraise raise value.with_traceback(tb) File "/usr/local/lib/python3.6/site-packages/sqlalchemy/engine/base.py", line 1244, in _execute_context cursor, statement, parameters, context File "/usr/local/lib/python3.6/site-packages/sqlalchemy/engine/default.py", line 552, in do_execute cursor.execute(statement, parameters) sqlalchemy.exc.OperationalError: (sqlite3.OperationalError) table graph already exists [SQL: CREATE TABLE graph ( id INTEGER NOT NULL, sha256 VARCHAR(255) NOT NULL, meta VARCHAR NOT NULL, category VARCHAR(255) NOT NULL, comment VARCHAR(255), file_path VARCHAR(255) NOT NULL, PRIMARY KEY (id), UNIQUE (sha256), UNIQUE (file_path) )

] (Background on this error at: http://sqlalche.me/e/e3q8) [2019-04-18 12:53:52 +0000] [11] [ERROR] Exception in worker process Traceback (most recent call last): File "/usr/local/lib/python3.6/site-packages/sqlalchemy/engine/base.py", line 1244, in _execute_context cursor, statement, parameters, context File "/usr/local/lib/python3.6/site-packages/sqlalchemy/engine/default.py", line 552, in do_execute cursor.execute(statement, parameters) sqlite3.OperationalError: table graph already exists

The above exception was the direct cause of the following exception:

Traceback (most recent call last): File "/usr/local/lib/python3.6/site-packages/gunicorn/arbiter.py", line 583, in spawn_worker worker.init_process() File "/usr/local/lib/python3.6/site-packages/gunicorn/workers/base.py", line 129, in init_process self.load_wsgi() File "/usr/local/lib/python3.6/site-packages/gunicorn/workers/base.py", line 138, in load_wsgi self.wsgi = self.app.wsgi() File "/usr/local/lib/python3.6/site-packages/gunicorn/app/base.py", line 67, in wsgi self.callable = self.load() File "/usr/local/lib/python3.6/site-packages/gunicorn/app/wsgiapp.py", line 52, in load return self.load_wsgiapp() File "/usr/local/lib/python3.6/site-packages/gunicorn/app/wsgiapp.py", line 41, in load_wsgiapp return util.import_app(self.app_uri) File "/usr/local/lib/python3.6/site-packages/gunicorn/util.py", line 350, in import_app import(module) File "/opt/beagle/beagle/web/wsgi.py", line 3, in app = create_app() File "/opt/beagle/beagle/web/server.py", line 48, in create_app db.create_all() File "/usr/local/lib/python3.6/site-packages/flask_sqlalchemy/init.py", line 963, in create_all self._execute_for_all_tables(app, bind, 'create_all') File "/usr/local/lib/python3.6/site-packages/flask_sqlalchemy/init.py", line 955, in _execute_for_all_tables op(bind=self.get_engine(app, bind), extra) File "/usr/local/lib/python3.6/site-packages/sqlalchemy/sql/schema.py", line 4287, in create_all ddl.SchemaGenerator, self, checkfirst=checkfirst, tables=tables File "/usr/local/lib/python3.6/site-packages/sqlalchemy/engine/base.py", line 2033, in _run_visitor conn._run_visitor(visitorcallable, element, kwargs) File "/usr/local/lib/python3.6/site-packages/sqlalchemy/engine/base.py", line 1607, in _run_visitor visitorcallable(self.dialect, self, kwargs).traverse_single(element) File "/usr/local/lib/python3.6/site-packages/sqlalchemy/sql/visitors.py", line 131, in traverse_single return meth(obj, kw) File "/usr/local/lib/python3.6/site-packages/sqlalchemy/sql/ddl.py", line 781, in visit_metadata _is_metadata_operation=True, File "/usr/local/lib/python3.6/site-packages/sqlalchemy/sql/visitors.py", line 131, in traverse_single return meth(obj, **kw) File "/usr/local/lib/python3.6/site-packages/sqlalchemy/sql/ddl.py", line 826, in visit_table include_foreign_key_constraints, File "/usr/local/lib/python3.6/site-packages/sqlalchemy/engine/base.py", line 988, in execute return meth(self, multiparams, params) File "/usr/local/lib/python3.6/site-packages/sqlalchemy/sql/ddl.py", line 72, in _execute_on_connection return connection._execute_ddl(self, multiparams, params) File "/usr/local/lib/python3.6/site-packages/sqlalchemy/engine/base.py", line 1050, in _execute_ddl compiled, File "/usr/local/lib/python3.6/site-packages/sqlalchemy/engine/base.py", line 1248, in _execute_context e, statement, parameters, cursor, context File "/usr/local/lib/python3.6/site-packages/sqlalchemy/engine/base.py", line 1466, in _handle_dbapi_exception util.raise_from_cause(sqlalchemy_exception, exc_info) File "/usr/local/lib/python3.6/site-packages/sqlalchemy/util/compat.py", line 383, in raise_from_cause reraise(type(exception), exception, tb=exc_tb, cause=cause) File "/usr/local/lib/python3.6/site-packages/sqlalchemy/util/compat.py", line 128, in reraise raise value.with_traceback(tb) File "/usr/local/lib/python3.6/site-packages/sqlalchemy/engine/base.py", line 1244, in _execute_context cursor, statement, parameters, context File "/usr/local/lib/python3.6/site-packages/sqlalchemy/engine/default.py", line 552, in do_execute cursor.execute(statement, parameters) sqlalchemy.exc.OperationalError: (sqlite3.OperationalError) table graph already exists [SQL: CREATE TABLE graph ( id INTEGER NOT NULL, sha256 VARCHAR(255) NOT NULL, meta VARCHAR NOT NULL, category VARCHAR(255) NOT NULL, comment VARCHAR(255), file_path VARCHAR(255) NOT NULL, PRIMARY KEY (id), UNIQUE (sha256), UNIQUE (file_path) )

] (Background on this error at: http://sqlalche.me/e/e3q8) [2019-04-18 12:53:52 +0000] [19] [ERROR] Exception in worker process Traceback (most recent call last): File "/usr/local/lib/python3.6/site-packages/sqlalchemy/engine/base.py", line 1244, in _execute_context cursor, statement, parameters, context File "/usr/local/lib/python3.6/site-packages/sqlalchemy/engine/default.py", line 552, in do_execute cursor.execute(statement, parameters) sqlite3.OperationalError: table graph already exists

The above exception was the direct cause of the following exception:

Traceback (most recent call last): File "/usr/local/lib/python3.6/site-packages/gunicorn/arbiter.py", line 583, in spawn_worker worker.init_process() File "/usr/local/lib/python3.6/site-packages/gunicorn/workers/base.py", line 129, in init_process self.load_wsgi() File "/usr/local/lib/python3.6/site-packages/gunicorn/workers/base.py", line 138, in load_wsgi self.wsgi = self.app.wsgi() File "/usr/local/lib/python3.6/site-packages/gunicorn/app/base.py", line 67, in wsgi self.callable = self.load() File "/usr/local/lib/python3.6/site-packages/gunicorn/app/wsgiapp.py", line 52, in load return self.load_wsgiapp() File "/usr/local/lib/python3.6/site-packages/gunicorn/app/wsgiapp.py", line 41, in load_wsgiapp return util.import_app(self.app_uri) File "/usr/local/lib/python3.6/site-packages/gunicorn/util.py", line 350, in import_app import(module) File "/opt/beagle/beagle/web/wsgi.py", line 3, in app = create_app() File "/opt/beagle/beagle/web/server.py", line 48, in create_app db.create_all() File "/usr/local/lib/python3.6/site-packages/flask_sqlalchemy/init.py", line 963, in create_all self._execute_for_all_tables(app, bind, 'create_all') File "/usr/local/lib/python3.6/site-packages/flask_sqlalchemy/init.py", line 955, in _execute_for_all_tables op(bind=self.get_engine(app, bind), extra) File "/usr/local/lib/python3.6/site-packages/sqlalchemy/sql/schema.py", line 4287, in create_all ddl.SchemaGenerator, self, checkfirst=checkfirst, tables=tables File "/usr/local/lib/python3.6/site-packages/sqlalchemy/engine/base.py", line 2033, in _run_visitor conn._run_visitor(visitorcallable, element, kwargs) File "/usr/local/lib/python3.6/site-packages/sqlalchemy/engine/base.py", line 1607, in _run_visitor visitorcallable(self.dialect, self, kwargs).traverse_single(element) File "/usr/local/lib/python3.6/site-packages/sqlalchemy/sql/visitors.py", line 131, in traverse_single return meth(obj, kw) File "/usr/local/lib/python3.6/site-packages/sqlalchemy/sql/ddl.py", line 781, in visit_metadata _is_metadata_operation=True, File "/usr/local/lib/python3.6/site-packages/sqlalchemy/sql/visitors.py", line 131, in traverse_single return meth(obj, **kw) File "/usr/local/lib/python3.6/site-packages/sqlalchemy/sql/ddl.py", line 826, in visit_table include_foreign_key_constraints, File "/usr/local/lib/python3.6/site-packages/sqlalchemy/engine/base.py", line 988, in execute return meth(self, multiparams, params) File "/usr/local/lib/python3.6/site-packages/sqlalchemy/sql/ddl.py", line 72, in _execute_on_connection return connection._execute_ddl(self, multiparams, params) File "/usr/local/lib/python3.6/site-packages/sqlalchemy/engine/base.py", line 1050, in _execute_ddl compiled, File "/usr/local/lib/python3.6/site-packages/sqlalchemy/engine/base.py", line 1248, in _execute_context e, statement, parameters, cursor, context File "/usr/local/lib/python3.6/site-packages/sqlalchemy/engine/base.py", line 1466, in _handle_dbapi_exception util.raise_from_cause(sqlalchemy_exception, exc_info) File "/usr/local/lib/python3.6/site-packages/sqlalchemy/util/compat.py", line 383, in raise_from_cause reraise(type(exception), exception, tb=exc_tb, cause=cause) File "/usr/local/lib/python3.6/site-packages/sqlalchemy/util/compat.py", line 128, in reraise raise value.with_traceback(tb) File "/usr/local/lib/python3.6/site-packages/sqlalchemy/engine/base.py", line 1244, in _execute_context cursor, statement, parameters, context File "/usr/local/lib/python3.6/site-packages/sqlalchemy/engine/default.py", line 552, in do_execute cursor.execute(statement, parameters) sqlalchemy.exc.OperationalError: (sqlite3.OperationalError) table graph already exists [SQL: CREATE TABLE graph ( id INTEGER NOT NULL, sha256 VARCHAR(255) NOT NULL, meta VARCHAR NOT NULL, category VARCHAR(255) NOT NULL, comment VARCHAR(255), file_path VARCHAR(255) NOT NULL, PRIMARY KEY (id), UNIQUE (sha256), UNIQUE (file_path) )

] (Background on this error at: http://sqlalche.me/e/e3q8) [2019-04-18 12:53:52 +0000] [8] [ERROR] Exception in worker process Traceback (most recent call last): File "/usr/local/lib/python3.6/site-packages/sqlalchemy/engine/base.py", line 1244, in _execute_context cursor, statement, parameters, context File "/usr/local/lib/python3.6/site-packages/sqlalchemy/engine/default.py", line 552, in do_execute cursor.execute(statement, parameters) sqlite3.OperationalError: table graph already exists

The above exception was the direct cause of the following exception:

Traceback (most recent call last): File "/usr/local/lib/python3.6/site-packages/gunicorn/arbiter.py", line 583, in spawn_worker worker.init_process() File "/usr/local/lib/python3.6/site-packages/gunicorn/workers/base.py", line 129, in init_process self.load_wsgi() File "/usr/local/lib/python3.6/site-packages/gunicorn/workers/base.py", line 138, in load_wsgi self.wsgi = self.app.wsgi() File "/usr/local/lib/python3.6/site-packages/gunicorn/app/base.py", line 67, in wsgi self.callable = self.load() File "/usr/local/lib/python3.6/site-packages/gunicorn/app/wsgiapp.py", line 52, in load return self.load_wsgiapp() File "/usr/local/lib/python3.6/site-packages/gunicorn/app/wsgiapp.py", line 41, in load_wsgiapp return util.import_app(self.app_uri) File "/usr/local/lib/python3.6/site-packages/gunicorn/util.py", line 350, in import_app import(module) File "/opt/beagle/beagle/web/wsgi.py", line 3, in app = create_app() File "/opt/beagle/beagle/web/server.py", line 48, in create_app db.create_all() File "/usr/local/lib/python3.6/site-packages/flask_sqlalchemy/init.py", line 963, in create_all self._execute_for_all_tables(app, bind, 'create_all') File "/usr/local/lib/python3.6/site-packages/flask_sqlalchemy/init.py", line 955, in _execute_for_all_tables op(bind=self.get_engine(app, bind), extra) File "/usr/local/lib/python3.6/site-packages/sqlalchemy/sql/schema.py", line 4287, in create_all ddl.SchemaGenerator, self, checkfirst=checkfirst, tables=tables File "/usr/local/lib/python3.6/site-packages/sqlalchemy/engine/base.py", line 2033, in _run_visitor conn._run_visitor(visitorcallable, element, kwargs) File "/usr/local/lib/python3.6/site-packages/sqlalchemy/engine/base.py", line 1607, in _run_visitor visitorcallable(self.dialect, self, kwargs).traverse_single(element) File "/usr/local/lib/python3.6/site-packages/sqlalchemy/sql/visitors.py", line 131, in traverse_single return meth(obj, kw) File "/usr/local/lib/python3.6/site-packages/sqlalchemy/sql/ddl.py", line 781, in visit_metadata _is_metadata_operation=True, File "/usr/local/lib/python3.6/site-packages/sqlalchemy/sql/visitors.py", line 131, in traverse_single return meth(obj, **kw) File "/usr/local/lib/python3.6/site-packages/sqlalchemy/sql/ddl.py", line 826, in visit_table include_foreign_key_constraints, File "/usr/local/lib/python3.6/site-packages/sqlalchemy/engine/base.py", line 988, in execute return meth(self, multiparams, params) File "/usr/local/lib/python3.6/site-packages/sqlalchemy/sql/ddl.py", line 72, in _execute_on_connection return connection._execute_ddl(self, multiparams, params) File "/usr/local/lib/python3.6/site-packages/sqlalchemy/engine/base.py", line 1050, in _execute_ddl compiled, File "/usr/local/lib/python3.6/site-packages/sqlalchemy/engine/base.py", line 1248, in _execute_context e, statement, parameters, cursor, context File "/usr/local/lib/python3.6/site-packages/sqlalchemy/engine/base.py", line 1466, in _handle_dbapi_exception util.raise_from_cause(sqlalchemy_exception, exc_info) File "/usr/local/lib/python3.6/site-packages/sqlalchemy/util/compat.py", line 383, in raise_from_cause reraise(type(exception), exception, tb=exc_tb, cause=cause) File "/usr/local/lib/python3.6/site-packages/sqlalchemy/util/compat.py", line 128, in reraise raise value.with_traceback(tb) File "/usr/local/lib/python3.6/site-packages/sqlalchemy/engine/base.py", line 1244, in _execute_context cursor, statement, parameters, context File "/usr/local/lib/python3.6/site-packages/sqlalchemy/engine/default.py", line 552, in do_execute cursor.execute(statement, parameters) sqlalchemy.exc.OperationalError: (sqlite3.OperationalError) table graph already exists [SQL: CREATE TABLE graph ( id INTEGER NOT NULL, sha256 VARCHAR(255) NOT NULL, meta VARCHAR NOT NULL, category VARCHAR(255) NOT NULL, comment VARCHAR(255), file_path VARCHAR(255) NOT NULL, PRIMARY KEY (id), UNIQUE (sha256), UNIQUE (file_path) )

] (Background on this error at: http://sqlalche.me/e/e3q8) [2019-04-18 12:53:52 +0000] [17] [ERROR] Exception in worker process Traceback (most recent call last): File "/usr/local/lib/python3.6/site-packages/sqlalchemy/engine/base.py", line 1244, in _execute_context cursor, statement, parameters, context File "/usr/local/lib/python3.6/site-packages/sqlalchemy/engine/default.py", line 552, in do_execute cursor.execute(statement, parameters) sqlite3.OperationalError: table graph already exists

The above exception was the direct cause of the following exception:

Traceback (most recent call last): File "/usr/local/lib/python3.6/site-packages/gunicorn/arbiter.py", line 583, in spawn_worker worker.init_process() File "/usr/local/lib/python3.6/site-packages/gunicorn/workers/base.py", line 129, in init_process self.load_wsgi() File "/usr/local/lib/python3.6/site-packages/gunicorn/workers/base.py", line 138, in load_wsgi self.wsgi = self.app.wsgi() File "/usr/local/lib/python3.6/site-packages/gunicorn/app/base.py", line 67, in wsgi self.callable = self.load() File "/usr/local/lib/python3.6/site-packages/gunicorn/app/wsgiapp.py", line 52, in load return self.load_wsgiapp() File "/usr/local/lib/python3.6/site-packages/gunicorn/app/wsgiapp.py", line 41, in load_wsgiapp return util.import_app(self.app_uri) File "/usr/local/lib/python3.6/site-packages/gunicorn/util.py", line 350, in import_app import(module) File "/opt/beagle/beagle/web/wsgi.py", line 3, in app = create_app() File "/opt/beagle/beagle/web/server.py", line 48, in create_app db.create_all() File "/usr/local/lib/python3.6/site-packages/flask_sqlalchemy/init.py", line 963, in create_all self._execute_for_all_tables(app, bind, 'create_all') File "/usr/local/lib/python3.6/site-packages/flask_sqlalchemy/init.py", line 955, in _execute_for_all_tables op(bind=self.get_engine(app, bind), extra) File "/usr/local/lib/python3.6/site-packages/sqlalchemy/sql/schema.py", line 4287, in create_all ddl.SchemaGenerator, self, checkfirst=checkfirst, tables=tables File "/usr/local/lib/python3.6/site-packages/sqlalchemy/engine/base.py", line 2033, in _run_visitor conn._run_visitor(visitorcallable, element, kwargs) File "/usr/local/lib/python3.6/site-packages/sqlalchemy/engine/base.py", line 1607, in _run_visitor visitorcallable(self.dialect, self, kwargs).traverse_single(element) File "/usr/local/lib/python3.6/site-packages/sqlalchemy/sql/visitors.py", line 131, in traverse_single return meth(obj, kw) File "/usr/local/lib/python3.6/site-packages/sqlalchemy/sql/ddl.py", line 781, in visit_metadata _is_metadata_operation=True, File "/usr/local/lib/python3.6/site-packages/sqlalchemy/sql/visitors.py", line 131, in traverse_single return meth(obj, **kw) File "/usr/local/lib/python3.6/site-packages/sqlalchemy/sql/ddl.py", line 826, in visit_table include_foreign_key_constraints, File "/usr/local/lib/python3.6/site-packages/sqlalchemy/engine/base.py", line 988, in execute return meth(self, multiparams, params) File "/usr/local/lib/python3.6/site-packages/sqlalchemy/sql/ddl.py", line 72, in _execute_on_connection return connection._execute_ddl(self, multiparams, params) File "/usr/local/lib/python3.6/site-packages/sqlalchemy/engine/base.py", line 1050, in _execute_ddl compiled, File "/usr/local/lib/python3.6/site-packages/sqlalchemy/engine/base.py", line 1248, in _execute_context e, statement, parameters, cursor, context File "/usr/local/lib/python3.6/site-packages/sqlalchemy/engine/base.py", line 1466, in _handle_dbapi_exception util.raise_from_cause(sqlalchemy_exception, exc_info) File "/usr/local/lib/python3.6/site-packages/sqlalchemy/util/compat.py", line 383, in raise_from_cause reraise(type(exception), exception, tb=exc_tb, cause=cause) File "/usr/local/lib/python3.6/site-packages/sqlalchemy/util/compat.py", line 128, in reraise raise value.with_traceback(tb) File "/usr/local/lib/python3.6/site-packages/sqlalchemy/engine/base.py", line 1244, in _execute_context cursor, statement, parameters, context File "/usr/local/lib/python3.6/site-packages/sqlalchemy/engine/default.py", line 552, in do_execute cursor.execute(statement, parameters) sqlalchemy.exc.OperationalError: (sqlite3.OperationalError) table graph already exists [SQL: CREATE TABLE graph ( id INTEGER NOT NULL, sha256 VARCHAR(255) NOT NULL, meta VARCHAR NOT NULL, category VARCHAR(255) NOT NULL, comment VARCHAR(255), file_path VARCHAR(255) NOT NULL, PRIMARY KEY (id), UNIQUE (sha256), UNIQUE (file_path) )

] (Background on this error at: http://sqlalche.me/e/e3q8) [2019-04-18 12:53:52 +0000] [13] [ERROR] Exception in worker process Traceback (most recent call last): File "/usr/local/lib/python3.6/site-packages/sqlalchemy/engine/base.py", line 1244, in _execute_context cursor, statement, parameters, context File "/usr/local/lib/python3.6/site-packages/sqlalchemy/engine/default.py", line 552, in do_execute cursor.execute(statement, parameters) sqlite3.OperationalError: table graph already exists

The above exception was the direct cause of the following exception:

Traceback (most recent call last): File "/usr/local/lib/python3.6/site-packages/gunicorn/arbiter.py", line 583, in spawn_worker worker.init_process() File "/usr/local/lib/python3.6/site-packages/gunicorn/workers/base.py", line 129, in init_process self.load_wsgi() File "/usr/local/lib/python3.6/site-packages/gunicorn/workers/base.py", line 138, in load_wsgi self.wsgi = self.app.wsgi() File "/usr/local/lib/python3.6/site-packages/gunicorn/app/base.py", line 67, in wsgi self.callable = self.load() File "/usr/local/lib/python3.6/site-packages/gunicorn/app/wsgiapp.py", line 52, in load return self.load_wsgiapp() File "/usr/local/lib/python3.6/site-packages/gunicorn/app/wsgiapp.py", line 41, in load_wsgiapp return util.import_app(self.app_uri) File "/usr/local/lib/python3.6/site-packages/gunicorn/util.py", line 350, in import_app import(module) File "/opt/beagle/beagle/web/wsgi.py", line 3, in app = create_app() File "/opt/beagle/beagle/web/server.py", line 48, in create_app db.create_all() File "/usr/local/lib/python3.6/site-packages/flask_sqlalchemy/init.py", line 963, in create_all self._execute_for_all_tables(app, bind, 'create_all') File "/usr/local/lib/python3.6/site-packages/flask_sqlalchemy/init.py", line 955, in _execute_for_all_tables op(bind=self.get_engine(app, bind), extra) File "/usr/local/lib/python3.6/site-packages/sqlalchemy/sql/schema.py", line 4287, in create_all ddl.SchemaGenerator, self, checkfirst=checkfirst, tables=tables File "/usr/local/lib/python3.6/site-packages/sqlalchemy/engine/base.py", line 2033, in _run_visitor conn._run_visitor(visitorcallable, element, kwargs) File "/usr/local/lib/python3.6/site-packages/sqlalchemy/engine/base.py", line 1607, in _run_visitor visitorcallable(self.dialect, self, kwargs).traverse_single(element) File "/usr/local/lib/python3.6/site-packages/sqlalchemy/sql/visitors.py", line 131, in traverse_single return meth(obj, kw) File "/usr/local/lib/python3.6/site-packages/sqlalchemy/sql/ddl.py", line 781, in visit_metadata _is_metadata_operation=True, File "/usr/local/lib/python3.6/site-packages/sqlalchemy/sql/visitors.py", line 131, in traverse_single return meth(obj, **kw) File "/usr/local/lib/python3.6/site-packages/sqlalchemy/sql/ddl.py", line 826, in visit_table include_foreign_key_constraints, File "/usr/local/lib/python3.6/site-packages/sqlalchemy/engine/base.py", line 988, in execute return meth(self, multiparams, params) File "/usr/local/lib/python3.6/site-packages/sqlalchemy/sql/ddl.py", line 72, in _execute_on_connection return connection._execute_ddl(self, multiparams, params) File "/usr/local/lib/python3.6/site-packages/sqlalchemy/engine/base.py", line 1050, in _execute_ddl compiled, File "/usr/local/lib/python3.6/site-packages/sqlalchemy/engine/base.py", line 1248, in _execute_context e, statement, parameters, cursor, context File "/usr/local/lib/python3.6/site-packages/sqlalchemy/engine/base.py", line 1466, in _handle_dbapi_exception util.raise_from_cause(sqlalchemy_exception, exc_info) File "/usr/local/lib/python3.6/site-packages/sqlalchemy/util/compat.py", line 383, in raise_from_cause reraise(type(exception), exception, tb=exc_tb, cause=cause) File "/usr/local/lib/python3.6/site-packages/sqlalchemy/util/compat.py", line 128, in reraise raise value.with_traceback(tb) File "/usr/local/lib/python3.6/site-packages/sqlalchemy/engine/base.py", line 1244, in _execute_context cursor, statement, parameters, context File "/usr/local/lib/python3.6/site-packages/sqlalchemy/engine/default.py", line 552, in do_execute cursor.execute(statement, parameters) sqlalchemy.exc.OperationalError: (sqlite3.OperationalError) table graph already exists [SQL: CREATE TABLE graph ( id INTEGER NOT NULL, sha256 VARCHAR(255) NOT NULL, meta VARCHAR NOT NULL, category VARCHAR(255) NOT NULL, comment VARCHAR(255), file_path VARCHAR(255) NOT NULL, PRIMARY KEY (id), UNIQUE (sha256), UNIQUE (file_path) )

] (Background on this error at: http://sqlalche.me/e/e3q8) [2019-04-18 12:53:52 +0000] [10] [ERROR] Exception in worker process Traceback (most recent call last): File "/usr/local/lib/python3.6/site-packages/sqlalchemy/engine/base.py", line 1244, in _execute_context cursor, statement, parameters, context File "/usr/local/lib/python3.6/site-packages/sqlalchemy/engine/default.py", line 552, in do_execute cursor.execute(statement, parameters) sqlite3.OperationalError: table graph already exists

The above exception was the direct cause of the following exception:

Traceback (most recent call last): File "/usr/local/lib/python3.6/site-packages/gunicorn/arbiter.py", line 583, in spawn_worker worker.init_process() File "/usr/local/lib/python3.6/site-packages/gunicorn/workers/base.py", line 129, in init_process self.load_wsgi() File "/usr/local/lib/python3.6/site-packages/gunicorn/workers/base.py", line 138, in load_wsgi self.wsgi = self.app.wsgi() File "/usr/local/lib/python3.6/site-packages/gunicorn/app/base.py", line 67, in wsgi self.callable = self.load() File "/usr/local/lib/python3.6/site-packages/gunicorn/app/wsgiapp.py", line 52, in load return self.load_wsgiapp() File "/usr/local/lib/python3.6/site-packages/gunicorn/app/wsgiapp.py", line 41, in load_wsgiapp return util.import_app(self.app_uri) File "/usr/local/lib/python3.6/site-packages/gunicorn/util.py", line 350, in import_app import(module) File "/opt/beagle/beagle/web/wsgi.py", line 3, in app = create_app() File "/opt/beagle/beagle/web/server.py", line 48, in create_app db.create_all() File "/usr/local/lib/python3.6/site-packages/flask_sqlalchemy/init.py", line 963, in create_all self._execute_for_all_tables(app, bind, 'create_all') File "/usr/local/lib/python3.6/site-packages/flask_sqlalchemy/init.py", line 955, in _execute_for_all_tables op(bind=self.get_engine(app, bind), extra) File "/usr/local/lib/python3.6/site-packages/sqlalchemy/sql/schema.py", line 4287, in create_all ddl.SchemaGenerator, self, checkfirst=checkfirst, tables=tables File "/usr/local/lib/python3.6/site-packages/sqlalchemy/engine/base.py", line 2033, in _run_visitor conn._run_visitor(visitorcallable, element, kwargs) File "/usr/local/lib/python3.6/site-packages/sqlalchemy/engine/base.py", line 1607, in _run_visitor visitorcallable(self.dialect, self, kwargs).traverse_single(element) File "/usr/local/lib/python3.6/site-packages/sqlalchemy/sql/visitors.py", line 131, in traverse_single return meth(obj, kw) File "/usr/local/lib/python3.6/site-packages/sqlalchemy/sql/ddl.py", line 781, in visit_metadata _is_metadata_operation=True, File "/usr/local/lib/python3.6/site-packages/sqlalchemy/sql/visitors.py", line 131, in traverse_single return meth(obj, **kw) File "/usr/local/lib/python3.6/site-packages/sqlalchemy/sql/ddl.py", line 826, in visit_table include_foreign_key_constraints, File "/usr/local/lib/python3.6/site-packages/sqlalchemy/engine/base.py", line 988, in execute return meth(self, multiparams, params) File "/usr/local/lib/python3.6/site-packages/sqlalchemy/sql/ddl.py", line 72, in _execute_on_connection return connection._execute_ddl(self, multiparams, params) File "/usr/local/lib/python3.6/site-packages/sqlalchemy/engine/base.py", line 1050, in _execute_ddl compiled, File "/usr/local/lib/python3.6/site-packages/sqlalchemy/engine/base.py", line 1248, in _execute_context e, statement, parameters, cursor, context File "/usr/local/lib/python3.6/site-packages/sqlalchemy/engine/base.py", line 1466, in _handle_dbapi_exception util.raise_from_cause(sqlalchemy_exception, exc_info) File "/usr/local/lib/python3.6/site-packages/sqlalchemy/util/compat.py", line 383, in raise_from_cause reraise(type(exception), exception, tb=exc_tb, cause=cause) File "/usr/local/lib/python3.6/site-packages/sqlalchemy/util/compat.py", line 128, in reraise raise value.with_traceback(tb) File "/usr/local/lib/python3.6/site-packages/sqlalchemy/engine/base.py", line 1244, in _execute_context cursor, statement, parameters, context File "/usr/local/lib/python3.6/site-packages/sqlalchemy/engine/default.py", line 552, in do_execute cursor.execute(statement, parameters) sqlalchemy.exc.OperationalError: (sqlite3.OperationalError) table graph already exists [SQL: CREATE TABLE graph ( id INTEGER NOT NULL, sha256 VARCHAR(255) NOT NULL, meta VARCHAR NOT NULL, category VARCHAR(255) NOT NULL, comment VARCHAR(255), file_path VARCHAR(255) NOT NULL, PRIMARY KEY (id), UNIQUE (sha256), UNIQUE (file_path) )

] (Background on this error at: http://sqlalche.me/e/e3q8) [2019-04-18 12:53:52 +0000] [14] [ERROR] Exception in worker process Traceback (most recent call last): File "/usr/local/lib/python3.6/site-packages/sqlalchemy/engine/base.py", line 1244, in _execute_context cursor, statement, parameters, context File "/usr/local/lib/python3.6/site-packages/sqlalchemy/engine/default.py", line 552, in do_execute cursor.execute(statement, parameters) sqlite3.OperationalError: table graph already exists

The above exception was the direct cause of the following exception:

Traceback (most recent call last): File "/usr/local/lib/python3.6/site-packages/gunicorn/arbiter.py", line 583, in spawn_worker worker.init_process() File "/usr/local/lib/python3.6/site-packages/gunicorn/workers/base.py", line 129, in init_process self.load_wsgi() File "/usr/local/lib/python3.6/site-packages/gunicorn/workers/base.py", line 138, in load_wsgi self.wsgi = self.app.wsgi() File "/usr/local/lib/python3.6/site-packages/gunicorn/app/base.py", line 67, in wsgi self.callable = self.load() File "/usr/local/lib/python3.6/site-packages/gunicorn/app/wsgiapp.py", line 52, in load return self.load_wsgiapp() File "/usr/local/lib/python3.6/site-packages/gunicorn/app/wsgiapp.py", line 41, in load_wsgiapp return util.import_app(self.app_uri) File "/usr/local/lib/python3.6/site-packages/gunicorn/util.py", line 350, in import_app import(module) File "/opt/beagle/beagle/web/wsgi.py", line 3, in app = create_app() File "/opt/beagle/beagle/web/server.py", line 48, in create_app db.create_all() File "/usr/local/lib/python3.6/site-packages/flask_sqlalchemy/init.py", line 963, in create_all self._execute_for_all_tables(app, bind, 'create_all') File "/usr/local/lib/python3.6/site-packages/flask_sqlalchemy/init.py", line 955, in _execute_for_all_tables op(bind=self.get_engine(app, bind), extra) File "/usr/local/lib/python3.6/site-packages/sqlalchemy/sql/schema.py", line 4287, in create_all ddl.SchemaGenerator, self, checkfirst=checkfirst, tables=tables File "/usr/local/lib/python3.6/site-packages/sqlalchemy/engine/base.py", line 2033, in _run_visitor conn._run_visitor(visitorcallable, element, kwargs) File "/usr/local/lib/python3.6/site-packages/sqlalchemy/engine/base.py", line 1607, in _run_visitor visitorcallable(self.dialect, self, kwargs).traverse_single(element) File "/usr/local/lib/python3.6/site-packages/sqlalchemy/sql/visitors.py", line 131, in traverse_single return meth(obj, kw) File "/usr/local/lib/python3.6/site-packages/sqlalchemy/sql/ddl.py", line 781, in visit_metadata _is_metadata_operation=True, File "/usr/local/lib/python3.6/site-packages/sqlalchemy/sql/visitors.py", line 131, in traverse_single return meth(obj, **kw) File "/usr/local/lib/python3.6/site-packages/sqlalchemy/sql/ddl.py", line 826, in visit_table include_foreign_key_constraints, File "/usr/local/lib/python3.6/site-packages/sqlalchemy/engine/base.py", line 988, in execute return meth(self, multiparams, params) File "/usr/local/lib/python3.6/site-packages/sqlalchemy/sql/ddl.py", line 72, in _execute_on_connection return connection._execute_ddl(self, multiparams, params) File "/usr/local/lib/python3.6/site-packages/sqlalchemy/engine/base.py", line 1050, in _execute_ddl compiled, File "/usr/local/lib/python3.6/site-packages/sqlalchemy/engine/base.py", line 1248, in _execute_context e, statement, parameters, cursor, context File "/usr/local/lib/python3.6/site-packages/sqlalchemy/engine/base.py", line 1466, in _handle_dbapi_exception util.raise_from_cause(sqlalchemy_exception, exc_info) File "/usr/local/lib/python3.6/site-packages/sqlalchemy/util/compat.py", line 383, in raise_from_cause reraise(type(exception), exception, tb=exc_tb, cause=cause) File "/usr/local/lib/python3.6/site-packages/sqlalchemy/util/compat.py", line 128, in reraise raise value.with_traceback(tb) File "/usr/local/lib/python3.6/site-packages/sqlalchemy/engine/base.py", line 1244, in _execute_context cursor, statement, parameters, context File "/usr/local/lib/python3.6/site-packages/sqlalchemy/engine/default.py", line 552, in do_execute cursor.execute(statement, parameters) sqlalchemy.exc.OperationalError: (sqlite3.OperationalError) table graph already exists [SQL: CREATE TABLE graph ( id INTEGER NOT NULL, sha256 VARCHAR(255) NOT NULL, meta VARCHAR NOT NULL, category VARCHAR(255) NOT NULL, comment VARCHAR(255), file_path VARCHAR(255) NOT NULL, PRIMARY KEY (id), UNIQUE (sha256), UNIQUE (file_path) )

] (Background on this error at: http://sqlalche.me/e/e3q8) [2019-04-18 12:53:52 +0000] [9] [INFO] Worker exiting (pid: 9) [2019-04-18 12:53:52 +0000] [19] [INFO] Worker exiting (pid: 19) [2019-04-18 12:53:52 +0000] [8] [INFO] Worker exiting (pid: 8) [2019-04-18 12:53:52 +0000] [12] [INFO] Worker exiting (pid: 12) [2019-04-18 12:53:52 +0000] [15] [INFO] Worker exiting (pid: 15) [2019-04-18 12:53:52 +0000] [17] [INFO] Worker exiting (pid: 17) [2019-04-18 12:53:52 +0000] [11] [INFO] Worker exiting (pid: 11) [2019-04-18 12:53:52 +0000] [14] [INFO] Worker exiting (pid: 14) [2019-04-18 12:53:52 +0000] [18] [INFO] Worker exiting (pid: 18) [2019-04-18 12:53:52 +0000] [13] [INFO] Worker exiting (pid: 13) [2019-04-18 12:53:52 +0000] [10] [INFO] Worker exiting (pid: 10) [2019-04-18 12:53:54 +0000] [16] [INFO] Worker exiting (pid: 16) Traceback (most recent call last): File "/usr/local/lib/python3.6/site-packages/gunicorn/arbiter.py", line 210, in run File "/usr/local/lib/python3.6/site-packages/gunicorn/arbiter.py", line 360, in sleep ready = select.select([self.PIPE[0]], [], [], 1.0) File "/usr/local/lib/python3.6/site-packages/gunicorn/arbiter.py", line 245, in handle_chld self.reap_workers() File "/usr/local/lib/python3.6/site-packages/gunicorn/arbiter.py", line 525, in reap_workers raise HaltServer(reason, self.WORKER_BOOT_ERROR) gunicorn.errors.HaltServer: <HaltServer 'Worker failed to boot.' 3>

During handling of the above exception, another exception occurred:

Traceback (most recent call last): File "/usr/local/bin/gunicorn", line 10, in sys.exit(run()) File "/usr/local/lib/python3.6/site-packages/gunicorn/app/wsgiapp.py", line 61, in run WSGIApplication("%(prog)s [OPTIONS] [APP_MODULE]").run() File "/usr/local/lib/python3.6/site-packages/gunicorn/app/base.py", line 223, in run super(Application, self).run() File "/usr/local/lib/python3.6/site-packages/gunicorn/app/base.py", line 72, in run Arbiter(self).run() File "/usr/local/lib/python3.6/site-packages/gunicorn/arbiter.py", line 232, in run self.halt(reason=inst.reason, exit_status=inst.exit_status) File "/usr/local/lib/python3.6/site-packages/gunicorn/arbiter.py", line 345, in halt self.stop() File "/usr/local/lib/python3.6/site-packages/gunicorn/arbiter.py", line 393, in stop time.sleep(0.1) File "/usr/local/lib/python3.6/site-packages/gunicorn/arbiter.py", line 245, in handle_chld self.reap_workers() File "/usr/local/lib/python3.6/site-packages/gunicorn/arbiter.py", line 525, in reap_workers raise HaltServer(reason, self.WORKER_BOOT_ERROR) gunicorn.errors.HaltServer: <HaltServer 'Worker failed to boot.' 3>

yampelo commented 5 years ago

Try deleting the beagle.db file in $PWD/data/beagle/ and re-running the container. Make sure you docker pull yampelo/beagle:latest first.

yampelo commented 5 years ago

still a problem?

Syedabeer commented 5 years ago

Problem solved. Thank you

On Wed, 29 May 2019, 5:22 am Omer Yampel, notifications@github.com wrote:

still a problem?

— You are receiving this because you authored the thread. Reply to this email directly, view it on GitHub https://github.com/yampelo/beagle/issues/31?email_source=notifications&email_token=ALZGOJG4QT62ZMJHX7NDIH3PXXEDHA5CNFSM4HHCZHH2YY3PNVWWK3TUL52HS4DFVREXG43VMVBW63LNMVXHJKTDN5WW2ZLOORPWSZGODWNZZIQ#issuecomment-496737442, or mute the thread https://github.com/notifications/unsubscribe-auth/ALZGOJDPLY4E76RPDQKKXRLPXXEDHANCNFSM4HHCZHHQ .