Thank you for a wonderful tool that provides insights into CGR mechanisms. I successfully ran the example data; however, I encountered an issue with the starfish_link step using my data. I am prompted with an error:
Error in if (clusterid1 == clusterid2 & clusterid1 != "") { :
missing value where TRUE/FALSE needed
Upon adding an if condition if (!is.na(clusterid1) && !is.na(clusterid2)) { , the run was successful without any errors, but my outputs still contain NAs. Could you please help me address this issue? For your convenience, I am attaching the sample data I used to estimate the CGRs.
Thank you,
Prashanthi Dharanipragada, PhD
Postdoctoral researcher at UCLA-Health
SVs.txt
Dear authors,
Thank you for a wonderful tool that provides insights into CGR mechanisms. I successfully ran the example data; however, I encountered an issue with the starfish_link step using my data. I am prompted with an error:
Upon adding an if condition
if (!is.na(clusterid1) && !is.na(clusterid2)) {, the run was successful without any errors, but my outputs still contain NAs. Could you please help me address this issue? For your convenience, I am attaching the sample data I used to estimate the CGRs.Thank you, Prashanthi Dharanipragada, PhD Postdoctoral researcher at UCLA-Health SVs.txt