NotImplementedError: Cannot convert a symbolic Tensor (meshgrid/Size_1:0) to a numpy array

yanglf1121 / NuSeT

NuSeT: A Deep Learning Tool for Reliably Separating and Analyzing Crowded Cells

MIT License

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NotImplementedError: Cannot convert a symbolic Tensor (meshgrid/Size_1:0) to a numpy array #3

Open antonkulaga opened 2 years ago

antonkulaga commented 2 years ago

I installed recommended dependencies, but got NotImplementedError: Cannot convert a symbolic Tensor (meshgrid/Size_1:0) to a numpy array here is my conda environment, OS is Linux Mint 20.2

name: nuset
channels:
  - defaults
  - conda-forge
  - bioconda
dependencies:
  - python=3.7
  - pillow
  - scikit-image
  - tensorflow-gpu==1.15.0
  - numpy
  - scikit-image
  - tqdm

antonkulaga commented 2 years ago

Looks like I figured out, I should fix older deps:

name: nuset
channels:
  - defaults
  - conda-forge
  - antonkulaga
  - bioconda
dependencies:
  - python=3.7
  - pillow
  - tensorflow-gpu==1.15.0
  - numpy==1.19.5
  - scikit-image==0.15.0
  - tqdm

this reliefs the error in CLI but GUI is still non-working