I am trying to process raw data [SRR27237045] using Cell Ranger. After downloading fastq file, I was encountered with an error when I running cellranger.
Log message:
An extremely low rate of correct barcodes was observed for all the candidate chemistry choices for the input: Sample E851 in "/home/wus/stereoseq/SRAToolkit/data". Please check your input data.
Hi,
I am trying to process raw data [SRR27237045] using Cell Ranger. After downloading fastq file, I was encountered with an error when I running cellranger.
[error] Pipestance failed. Error log at: E851/SC_RNA_COUNTER_CS/SC_MULTI_CORE/MULTI_CHEMISTRY_DETECTOR/DETECT_COUNT_CHEMISTRY/fork0/chnk0-ud8c09f3d30/_errors
Log message: An extremely low rate of correct barcodes was observed for all the candidate chemistry choices for the input: Sample E851 in "/home/wus/stereoseq/SRAToolkit/data". Please check your input data.
Do you know why it happened? Any suggestions?