yanlinlin82 seqpipe issues

yanlinlin82 / seqpipe

A framework for SEQuencing data analysis PIPElines.

http://yanlinlin82.github.io/seqpipe/

MIT License

7 stars 4 forks source link

issues

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Define 'load' for command

#23 yanlinlin82 opened 8 years ago
0
Simplify comment-style options

#22 yanlinlin82 closed 7 years ago
0
Prompt for wrongly using '-e'

#21 yanlinlin82 closed 7 years ago
1
Search directories in SEQPIPE_LIB for module file

#20 yanlinlin82 closed 9 years ago
0
File dependency checking failed when inline shell command in for loop

#19 GoogleCodeExporter opened 9 years ago
0
Warn if requires/inputs/outputs do not appear in command

#18 GoogleCodeExporter opened 9 years ago
0
Do not expand variables in single quote marks

#17 GoogleCodeExporter opened 9 years ago
0
Do not expand variables in command line

#16 GoogleCodeExporter opened 9 years ago
0
Show less functions by default

#15 GoogleCodeExporter closed 9 years ago
2
Loading failed when there is empty line after SP_for_parallel

#14 GoogleCodeExporter closed 9 years ago
1
Dependency checking error when step has only output without input

#13 GoogleCodeExporter closed 9 years ago
1
Add name for each command

#12 GoogleCodeExporter closed 9 years ago
1
No effect of requires/inputs/outputs in SP_if block

#11 GoogleCodeExporter closed 9 years ago
2
Missed 'sysinfo' Procedure for Indirectly Called Procedures

#10 GoogleCodeExporter opened 9 years ago
1
[deleted issue]

#9 GoogleCodeExporter closed 9 years ago
0
[deleted issue]

#8 GoogleCodeExporter closed 9 years ago
0
Different run Log may be writen into same directory

#7 GoogleCodeExporter closed 9 years ago
1
Process bulk output files

#6 GoogleCodeExporter opened 9 years ago
2
Process directory for '-m' option

#5 GoogleCodeExporter closed 9 years ago
1
Provide method to list procedures from specific module file

#4 GoogleCodeExporter closed 9 years ago
1
Do not infer requires/inputs/outputs for procedure when any of them is declared

#3 GoogleCodeExporter closed 9 years ago
1
Do not put intermediate files as temporary files by default

#2 GoogleCodeExporter closed 9 years ago
1
File dependencies of procedure should be inferred when using SP_run

#1 GoogleCodeExporter closed 9 years ago
1