Colons in job file name causing problems with SGE qsub

[sepidehparhami]

It seems that the scripts getting submitted to the queue as jobs are each named with a time stamp, which contains colons in hh:mm:ss format. The qsub command does not accept files with colons in the name so the jobs do not get submitted properly. A different delimiter should be substituted to avoid the problem.

[richardjenner]

Dear Yarden, We're having the same problem here at UCL. Please could you let me know of any simple edits to the code that can be made to get MISO to write different job filenames compatible with the job submission system. Thanks, Richard