Traceback (most recent call last):
File "/usr/local/bin/sashimi_plot", line 9, in
load_entry_point('misopy==0.5.3', 'console_scripts', 'sashimi_plot')()
File "/usr/local/lib/python2.7/dist-packages/misopy/sashimi_plot/sashimi_plot.py", line 276, in main
plot_label=plot_label)
File "/usr/local/lib/python2.7/dist-packages/misopy/sashimi_plot/sashimi_plot.py", line 142, in plot_event
%(event_name, pickle_dir)
Exception: Event misocomp_-3865436414453376553 not found in pickled directory /data/bioit/biodata/mengf/Project/Penile_cancer/GRCh37-results/Analysis-20170614/Altersplicing/Filt_trans_protein/generate_events/commonshortest/SE. Are you sure this is the right directory for the event?
Use events raw id substitute compressed id, plot pdf was made with 'WARNING: MISO file not found'
Any solution can solve this problem?
index_gff run with --compressed-id parameter, but when using sashimi_plot scripts, 'can't fint pickle file happend', as followed:
commond: sashimiplot --plot-event misocomp-3865436414453376553 data/bioit/biodata/mengf/Project/Penile_cancer/GRCh37-results/Analysis-20170614/Altersplicing/Filt_trans_protein/generate_events/commonshortest/SE sashimi_plot_settings_len100_SE.txt --output-dir events
Traceback (most recent call last): File "/usr/local/bin/sashimi_plot", line 9, in
load_entry_point('misopy==0.5.3', 'console_scripts', 'sashimi_plot')()
File "/usr/local/lib/python2.7/dist-packages/misopy/sashimi_plot/sashimi_plot.py", line 276, in main
plot_label=plot_label)
File "/usr/local/lib/python2.7/dist-packages/misopy/sashimi_plot/sashimi_plot.py", line 142, in plot_event
%(event_name, pickle_dir)
Exception: Event misocomp_-3865436414453376553 not found in pickled directory /data/bioit/biodata/mengf/Project/Penile_cancer/GRCh37-results/Analysis-20170614/Altersplicing/Filt_trans_protein/generate_events/commonshortest/SE. Are you sure this is the right directory for the event?
Use events raw id substitute compressed id, plot pdf was made with 'WARNING: MISO file not found' Any solution can solve this problem?
Thanks for help!