Open edkonyakhina opened 6 years ago
We were planning to run liftOver to generate these from the hg19 versions but would rather not have to do that. Any timeline on a solution to this or is it not currently planned?
I think you might be better off building it yourself with index_gff and download the gff3 from the table browser. And may not work on entire genome due to issues, So pick genes that you interested in. I found that the hg19 annotation were wrong at best and not complete.
Does anyone has done the annotation file before or could you please share some experiences with me to chose the suitable one?
Hello! I use GRCh38 reference in my work. Could you provide Alternative Splicing Events annotations for this reference or tell how can I make it? I need annotations for Intron Retention.
Many thanks, Evgeniya