After some trial and error, it seems that misopy only works with samtools <= 1.2. As far as I can tell, this is not documented in the Read the Docs. Can you please add a note about this? I found at least a couple open issues that are most likely be due to using more recent versions of samtools. Thank you.
After some trial and error, it seems that misopy only works with samtools <= 1.2. As far as I can tell, this is not documented in the Read the Docs. Can you please add a note about this? I found at least a couple open issues that are most likely be due to using more recent versions of samtools. Thank you.